| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2307 |
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| Symbol | |
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| ID | 7090291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2500914 |
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| End bp | 2501825 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643465630 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_002362600 |
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| Protein GI | 217978453 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00328793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCTGCTG CGCTGCCAAT GATCTCGGGT GAGAGTGGTC TCGCCCGTTA TTTGAACGAA
ATCAGACGGT TCCCCATGCT GGAGCCGCAA CAGGAATATA TGCTGGCCAA GCGCTGGCGC
GAGCACGCCG ATTCCGACGC CGCGCATAAG CTTGTCACGT CCCACCTTCG CCTCGTCGCC
AAGATCGCGA TGGGCTATCG CGGCTATGGC CTGCCGATCA GCGAAGTCGT CTCGGAAGGC
AATGTCGGTC TTATGCAGGC CGTCAAGCGC TTTGAACCCG AGAAAGGGTT CCGCCTAGCC
ACCTATGCCA TGTGGTGGAT CCGCGCGTCG ATTCAAGAGT ATATCCTGCG CTCGTGGTCG
CTTGTGAAGA TGGGCACCAC CGCCAGCCAG AAGAAACTCT TCTTCAATCT TCGCAAGGTG
AAGAGCCAGA TCTCGGCGCT GGAAGAGGGC GATCTGCGTC CCGAGCACGT CGACAAGATC
GCGCACCGGC TTGGCGTGTC CAAGCAGGAC GTGATCGACA TGAACCGCCG CATGTCCGGC
GACGCCTCGC TGAACGCTCC TTTGCGCGAG GAAGGCGAAG GCGAATGGCA GGATTGGCTT
GTCGATGACA GCGCCAGTCA GGAAAAACTG CTGGTCGACC GCGAAGAGAC GGACAATCGG
CTCGGCGCCC TGCATACGGC TCTGAACGTG CTGAACGACC GCGAGCGGCG CATTTTCGAG
GCGCGCCGCC TTGCCGACGA TCCGATGACG CTGGAGGCTC TCTCCGACGA ATTCGACATC
TCGCGCGAGC GCGTCCGTCA GATCGAAGTT CGCGCCTTTG AAAAGGTGCA GTCGGCCGTC
AAGGCGGGCG TCGCCCGCGT CGAGGCGGGC GCGCGCAGAG CTCAGATCGC CGGTCCGGCC
GCGCAAGCCT GA
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| Protein sequence | MAAALPMISG ESGLARYLNE IRRFPMLEPQ QEYMLAKRWR EHADSDAAHK LVTSHLRLVA
KIAMGYRGYG LPISEVVSEG NVGLMQAVKR FEPEKGFRLA TYAMWWIRAS IQEYILRSWS
LVKMGTTASQ KKLFFNLRKV KSQISALEEG DLRPEHVDKI AHRLGVSKQD VIDMNRRMSG
DASLNAPLRE EGEGEWQDWL VDDSASQEKL LVDREETDNR LGALHTALNV LNDRERRIFE
ARRLADDPMT LEALSDEFDI SRERVRQIEV RAFEKVQSAV KAGVARVEAG ARRAQIAGPA
AQA
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