Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2301 |
Symbol | |
ID | 7090285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 2495042 |
End bp | 2496553 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643465624 |
Product | protein of unknown function DUF404 |
Protein accession | YP_002362594 |
Protein GI | 217978447 |
COG category | [S] Function unknown |
COG ID | [COG2308] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0119627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGAGATG GGCGCTATTT CGATGAAATG ACCCTGGACG GCGGCAAGAT TCGCCCCGTC TACGGCAAGA TCGCCCGCTG GCTGGAGGCG ACGCCGATGG AGCATCTGTC CTCGCGGCGC GCGCAGGCCG AACTGCTGTT TCGCCGCATG GGCATCACCT TCGCCGTCTA TGGCGAGAAG GACGCTGGCG AGCGTCTCAT TCCCTTCGAC ATCATCCCGC GCATCATGCT GCGCTCGGAA TGGACAAGGC TCGAGGCCGG GCTGCTCCAG CGCGTCAAGG CGCTGAACGC CTTTTTGAAG GACGTTTATG GGGCGCAGGA GATCATCAAA TCCGGCAAGA TTCCGGCCGA CCTCATTCTG AACAATCCCG AGTTCCGCCC CGAGATGGTC GGGCGGCCCG TGCCCCATGA CATTTACGTG CAGATCGCGG GCATCGACGT CGTGCGCACC GACGAAGATG ATTTCTACGT GCTCGAGGAT AATGTGCGCA CGCCCTCCGG CGTCTCCTAT ATGCTGGAGA ACCGTGAGGT GATGATGCGG CTGATGCCGG ATCTGTTCGC CGAGCATCGC GTCGCGCCGA TCGAGAACTA TCCCGACGTT CTGCTCGCGG CGCTGCGCTC GGTCGCGCCC CATGGAGAGA GCCAGGCGAC CATCGCCCTG CTGACGCCAG GACGATTCAA CTCGGCCTAT TACGAGCACT CCTTCCTTGC CGACAAGCTT GGCGTCGAAC TGGTCGAAGG ACGCGATTTG TTCGTCGAGA GCGATAAGCT GTTCATGCGC ACCACGCAGG GGCCGCGGCA GGTCGACGTG CTGTACCGGC GCATTGACGA TAAATTCCTC GATCCGGAAG TGTTTCATCC CGATTCCGTG CTGGGCGTGC CGGGACTGAT GCGGGCCTAT CACGCCGGCA ATGTCACCTT GGCCAACGCC GTCGGCACCG GCGTCGCCGA CGACAAGGCG ATCTACACTT ACATGCCGGA GATCATCGAG TTCTTTCTCG GCGAGAAGGC GCTGTTGAAG AATGTGCCGA CGTGGCGCTG CCGCGAGCCC GAGGCGCTGC GCCATGTGCT CGCCAATCTC GGCGATCTCG TCGTCAAGGA GGTCAATGGC TCGGGCGGCT ATGGCATGCT CGTCGGCCCG CGCGCCACCA AGGCGCAGAT CGAAGCCTTC GCCGCAAAAC TCGCCAAAGA CCCCAATAAT TTCATCGCCC AGCCGACGCT GGCGCTCTCC ACCACGCCGA CCTTCTTCGA CACCGGCATC GCGCCGCGCC ATGTCGATCT GAGGCCGTTC ATTCTCACCG GGACGAATGG CGTCCGCGTC GTGCCGGGCG GCTTGACGCG GGTGGCGCTG ATCGAGAATT CGCTCGTCGT CAATTCGAGC CAGGGCGGCG GCACGAAGGA TACCTGGGTC GTCGATGATT CCATCTTCGA TCCGCAGCAA TCCTTCCAAA GCCAGAGCCA GAGTCAGGGT TATCAAGGCC AAAGCCAGAG CCAGACCCAA ACGCAATCTT AA
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Protein sequence | MGDGRYFDEM TLDGGKIRPV YGKIARWLEA TPMEHLSSRR AQAELLFRRM GITFAVYGEK DAGERLIPFD IIPRIMLRSE WTRLEAGLLQ RVKALNAFLK DVYGAQEIIK SGKIPADLIL NNPEFRPEMV GRPVPHDIYV QIAGIDVVRT DEDDFYVLED NVRTPSGVSY MLENREVMMR LMPDLFAEHR VAPIENYPDV LLAALRSVAP HGESQATIAL LTPGRFNSAY YEHSFLADKL GVELVEGRDL FVESDKLFMR TTQGPRQVDV LYRRIDDKFL DPEVFHPDSV LGVPGLMRAY HAGNVTLANA VGTGVADDKA IYTYMPEIIE FFLGEKALLK NVPTWRCREP EALRHVLANL GDLVVKEVNG SGGYGMLVGP RATKAQIEAF AAKLAKDPNN FIAQPTLALS TTPTFFDTGI APRHVDLRPF ILTGTNGVRV VPGGLTRVAL IENSLVVNSS QGGGTKDTWV VDDSIFDPQQ SFQSQSQSQG YQGQSQSQTQ TQS
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