| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2053 |
|---|
| Symbol | |
|---|
| ID | 7094251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2227219 |
|---|
| End bp | 2228760 |
|---|
| Gene Length | 1542 bp |
|---|
| Protein Length | 513 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643465377 |
|---|
| Product | chlorophyllide reductase subunit Y |
|---|
| Protein accession | YP_002362355 |
|---|
| Protein GI | 217978208 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02015] chlorophyllide reductase subunit Y |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0326514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA CGCTCCTTCC CTCCGACAAG ACCGCGCTCG AAGCCGGGGC GCCCGTCGCG
CATGGCGATG GCCTCGGTTG CCACGCGGGC GCCGGGGAGA TGCGCCGCGC CGCCGCGGCG
GCGGGCAAGA GCGAGACGCT GGATCGCTAC GCGGCCGACT ATCCGGCCGG CCCGCACGAC
CAGCCGCAAA GCATGTGCCC GGCGTTTGGC TCGCTGCGCG TCGGGCTGCG CATGCGCCGC
ACCGCCACCG TGCTCAGCGG CTCGGCTTGT TGCGTCTACG GACTGACCTT CACCTCGCAT
TTTTACGGTG CGCGGCGCAC GGTCGGCTAC GTGCCGTTCA ACTCGGAATC GCTTGTCACG
GGAAAGCTGT TCGAAGACAT TCGCGGCGCT GTGTTTGGCC TCGCCGATCC CCAACTCTAC
GACGCCATCG TGATCATTAA TCTGTGCGTT CCGACCGCCT CCGGCGTGCC CCTGCAGATC
CTGCCGAAGG AAATCAATGG CGTTCGCATC ATCGGGATTG ACGTGCCGGG ATTCGGCGTT
CCGACCCACG CCGAAGCCAA GGACGTTCTC GCCGCGGCCA TGCTGCGCTA CGCCCGCGTG
GAGGCGGAAC AGGGCGCCGT ACAGGCGCCG CGCGCCGGCC GCAGCGAGCG GCCGACGATA
ACGCTTCTCG GTGAACTGTT CCCCGCCGAT CCCGTACAGA TCGGCATGAT GCTGGAGCCG
CTCGGCCTTG CCGCCGGTCC TGCCGTTCCG ACGCGCGAAT GGCGCGAGCT CTACGCCGCC
TATGACTGCG CTGCGGTCGC CGCCATTCAT CCCTTTTATC GCGCTTCGAT CCGCGAATTC
GAGGCCGCCA GCCGCAAGAT CGTAGGCTCT GCCCCAGTGG GCAGCGAAGG AACGGAAAGC
TGGCTAAACG CCATCGGCGA GGCCTGCGGC GTCCCGCGCG CAAAGATCGA CGCCGCCAAC
AACCGGCTGC TACCGATCAT CCGGGCCGCG CTCGCCGCAA GGCCGGTCAA GGGGCGCATT
ACGCTTTCGG GCTATGAGGG TTCCGAGCTT CTCGTCGGAC GGTTGCTCGT GGAGAGCGGC
GCCGATGTCC GCTATGTCGG GACGGCGTGT CCGCTGACGC CCTGGTCGGA GCAGGACCGG
CAATGGCTTG AGGCCAAGGG CGTCAAAGTT CAGTTCCGCG CCTCGCTGGA GCACGACCTC
GCCGCGCTCG CCGAATATCA ACCGGACCTT GCGATCGGCA CGACGCCGGT GGTGCAGAAG
GCCAAGCAGG GCGGCACGCC CGCGCTCTAT TTCACCAATC TCATTTCGGC GCGGCCGCTG
ATGGGGCCGG CAGGGGCGGG CTCGCTCGCC GAGGTCGTCA ACGCTTCGCT CGCGGCCAAG
CCGCGCTTCG ACGCCATGCG CGAATTTTTC GAGGATGTCG GCGAAGGCTT TGCCGCGGGC
GTATGGGAGA AGAAGCCGAC GGACCGGCCG GAATTTCGCG CGCTCTACAA GCGCCGCGTC
GAGGCGAACG CCAAGGCGCG TCAGGGCGAG GATATCAAAT AA
|
|---|
| Protein sequence | MNKTLLPSDK TALEAGAPVA HGDGLGCHAG AGEMRRAAAA AGKSETLDRY AADYPAGPHD
QPQSMCPAFG SLRVGLRMRR TATVLSGSAC CVYGLTFTSH FYGARRTVGY VPFNSESLVT
GKLFEDIRGA VFGLADPQLY DAIVIINLCV PTASGVPLQI LPKEINGVRI IGIDVPGFGV
PTHAEAKDVL AAAMLRYARV EAEQGAVQAP RAGRSERPTI TLLGELFPAD PVQIGMMLEP
LGLAAGPAVP TREWRELYAA YDCAAVAAIH PFYRASIREF EAASRKIVGS APVGSEGTES
WLNAIGEACG VPRAKIDAAN NRLLPIIRAA LAARPVKGRI TLSGYEGSEL LVGRLLVESG
ADVRYVGTAC PLTPWSEQDR QWLEAKGVKV QFRASLEHDL AALAEYQPDL AIGTTPVVQK
AKQGGTPALY FTNLISARPL MGPAGAGSLA EVVNASLAAK PRFDAMREFF EDVGEGFAAG
VWEKKPTDRP EFRALYKRRV EANAKARQGE DIK
|
|---|
| |