| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1748 |
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| Symbol | |
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| ID | 7090860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 1903702 |
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| End bp | 1904952 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643465071 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002362056 |
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| Protein GI | 217977909 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAGC TTACCTGGAT CAATGCCGCG CTCACCGCCG CCCGGCCACA GGCGATCGCC
GCGCTGATGC GCTACTTTCG CGATCTCGAC ACGGCGGAGG AAGCCTTTCA GGACGCCTGC
CTGCGCGCGC TCCGCAATTG GCCCCAGAAC GGGCCGCCGC GCGACCCCAC GGCCTGGCTG
ATCCTCGTCG GCCGCAACGC CGCGCTCGAC GGCGTTCGCA AGCGGGCGAA GCTCGCCCCG
CTCCCGCCCG ACGAGGCGAT CTCGGATCTC GGCGACGCCG AAGCCGAACT CGCCGAGCGG
CTCGACGGCG CCCATTACCG CGACGACGTG CTGCGTCTTC TGTTCGTCTG CTGCGCGGAC
AGTCTACCGC CCGGCCAGCA AATCGCGCTG GCGCTGCGGA TCGTTTCGGG GCTCAGCGTG
CGCCAGATCG CGCGCGCCTT TCTTACCAGC GAAGGCGCGA TGGAGCAGCG CATCACCCGC
GCCAAGGCGA AGATTGCGCG CTCCGAGATC CCATTCGAGG CGCCCGGCCC GGTGGAGCGC
GCCGAGCGGC TCGGCGCCGT CGCCGCGATG ATCTACCTCG TCTTCAACGA AGGCTATTCG
TCCGGCGAAT CCTCCGTTCG CGGGTGCCTG TGCGAAGAGG CGATCAGGCT GGCGCGGCTG
CTGTTGCGTC TGTTCCAGAC CGAGCCCGAA ATCATGGGCC TGACGGCCCT GATGCTGCTC
CAGCACGCCC GCGCCGCAGC GCGCTTCGAC GAGGCCGGCG CAATCATCCT TCTCGACGAT
CAGGATCGGA GCCTCTGGGA CGGCAAGCTG ATCGCCGAAG GGCTGGCGCT GATCGACAAG
GCGCTGCGCC ATCGCCAGCC GGGGGCCTAC CAGATACAGG CCGCGATCGC CGCGACGCAC
GCCCGCGCCA ATCGGCCGGA AGAGACCGAT TGGAGGCAGA TCGACGCGCT TTATGCTGCG
CTTGAACGGC TGCAGCCCTC CCCGGTCGTC ACGCTCAACC GGGCAGTCGC CGTCAGCAAG
ACGCGTGGAC CAGCCGCGGC GCTGGAGATG ATCGCGCCGC TGGCGGCGCA GCTTTCCGGA
TATTTCTACT TCTTCGGAGC AAAGGGCGCG TTTCTTTCTG AGCTCGGCCG CAGGGAGGAA
GCGCGCGCGG CGTTTACCCA GGCGATCGCG CTCGCCAACT CGCCCGCGGA AGCCGCCCAT
ATCCGCATGC ATCTCGATCG CCTGACGCAG GCGACTGAGG CTTCGCCATA A
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| Protein sequence | MNELTWINAA LTAARPQAIA ALMRYFRDLD TAEEAFQDAC LRALRNWPQN GPPRDPTAWL
ILVGRNAALD GVRKRAKLAP LPPDEAISDL GDAEAELAER LDGAHYRDDV LRLLFVCCAD
SLPPGQQIAL ALRIVSGLSV RQIARAFLTS EGAMEQRITR AKAKIARSEI PFEAPGPVER
AERLGAVAAM IYLVFNEGYS SGESSVRGCL CEEAIRLARL LLRLFQTEPE IMGLTALMLL
QHARAAARFD EAGAIILLDD QDRSLWDGKL IAEGLALIDK ALRHRQPGAY QIQAAIAATH
ARANRPEETD WRQIDALYAA LERLQPSPVV TLNRAVAVSK TRGPAAALEM IAPLAAQLSG
YFYFFGAKGA FLSELGRREE ARAAFTQAIA LANSPAEAAH IRMHLDRLTQ ATEASP
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