Gene Msil_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1480 
Symbol 
ID7091823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1598954 
End bp1599718 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID643464814 
Product4-oxalocrotonate decarboxylase 
Protein accessionYP_002361800 
Protein GI217977653 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGACA TCGTCAAATT CGCCGAAATC GTCGACGAGG CCGCGCGGAT CGCGAAGGCG 
ATCCCGCAGT TCACGACATC GGCGCCGCTC GGCGTGGACG AGGCCTATGA CGTCCAGGCG
CGCTCCATCG AAAGGCGCCT TGCGCGTGGC GAGAGCCTCG TCGGCGTGAA AATGGGACTC
ACCTCTCGCG CCAAGATGAT TCAGGTCGGC GTCGATGAAG TCATCTGGGG CCGCCTCACC
GACGCCATGC GGCTCGAGGA AGGCGGCGCG CTATCGAAGA AGCGCTACGT CCACCCGCGC
ATCGAGCCGG AGCTCGCCTT CCTGATGAAG CGCGAACTGT CGGGGGACGT TTCGGCGGCG
GAAGCCTTGA GCGCGGTCGA GGCCATCGCC CCGGCGATGG AAATCATCGA TTCGCGCTAT
GAGAATTTCA AATTCGCTCT GCCGGATGTC ATCGCCGACA ATTCCTCGTC ATCCGGTTTC
GTCGTCGGAA ACTGGGGGCG TCCAGACCAG GATTTCTCCA ATCTCGGCAT CGTCATGGAA
GTCGACGGAC GCGCCGTCCA GATCGGCTCG ACGGCGGCGA TCCTCGGCCA TCCCACCCGC
TCACTTGTCG CGGCGGCGCG GGTCGCGGCC TGCATTGGCG GCCTGAAGCC CGGTTGGATC
GTCCTGGCTG GCGGCGCCAC CGCCGCGCAC CCGCTGAGCG TCGGCCAGCA TGTGCGCACT
ATCATACAGA ATCTCGGTTC GGTCTCGATC AGCATCACGG ACTAA
 
Protein sequence
MNDIVKFAEI VDEAARIAKA IPQFTTSAPL GVDEAYDVQA RSIERRLARG ESLVGVKMGL 
TSRAKMIQVG VDEVIWGRLT DAMRLEEGGA LSKKRYVHPR IEPELAFLMK RELSGDVSAA
EALSAVEAIA PAMEIIDSRY ENFKFALPDV IADNSSSSGF VVGNWGRPDQ DFSNLGIVME
VDGRAVQIGS TAAILGHPTR SLVAAARVAA CIGGLKPGWI VLAGGATAAH PLSVGQHVRT
IIQNLGSVSI SITD