Gene Msil_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1163 
Symbol 
ID7093926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1250181 
End bp1250954 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content65% 
IMG OID643464504 
ProductABC transporter related 
Protein accessionYP_002361494 
Protein GI217977347 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.119429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGG CGCCCCCGCC CTCGCTCCCG CAGTTGGCCC AGCTCCGCGG CGTCTCGAAA 
TTCTATGAAA ACGGCGTCGA GGCGCTGCGC GACGTCGATC TCGACGTTCG CGCGGAGGAA
TTTCTAGCTC TGCTCGGGCC GTCCGGCTGC GGCAAGTCGA CCATTTTGCG GCTGATCGCC
GGGCTTGAGG CGCCCAGCGC CGGAACTCTT ACCCGCTCTT TTGCGGCGGG CAGCGTTGGC
TTCGTGTTCC AGGAGCCAAC GCTGATGCCC TGGGCCAAAG TGTTCGACAA TGTTTTTCTC
CCGCTGCGCC TTGCCGGACA AAGTCGAGGC AAAGCGGCGG CCGCCGTCGA GCAGGCGCTG
GCGCTCGTCG GGCTCGAGGC CTTCCAAAAC GCCTTTCCGA ACGAACTTTC CGGCGGCATG
AAAATGCGCG TCTCGATCGC CCGCGCGCTG GCTCCCCGCC CTTCCCTCAT CCTGATGGAT
GAACCTTTCG CCGCGCTGGA CGAAATCACC CGCTTCCAGC TCAACGACGA TCTGTTGCGA
CTGCGCCATG AGACCGGCGC GACGATCGTC TTCGTCACCC ATTCGATTTT CGAGGCGGCC
TATCTTTCGA CCCGCATCGC CGTCATGAGC CCGCGCCCGG GACGAATCGT TGCGGAAATC
GACGCCGAGG CGCCGCGCGG GGCCGAGAAT TTTCGCTCGA GCCCGGCTTT CGCGGCGCTG
TGCGAGGCGG CCTCGAACGC TTTGCATCGG GCCATGGGCG AGGAGGCGTC TTGA
 
Protein sequence
MTQAPPPSLP QLAQLRGVSK FYENGVEALR DVDLDVRAEE FLALLGPSGC GKSTILRLIA 
GLEAPSAGTL TRSFAAGSVG FVFQEPTLMP WAKVFDNVFL PLRLAGQSRG KAAAAVEQAL
ALVGLEAFQN AFPNELSGGM KMRVSIARAL APRPSLILMD EPFAALDEIT RFQLNDDLLR
LRHETGATIV FVTHSIFEAA YLSTRIAVMS PRPGRIVAEI DAEAPRGAEN FRSSPAFAAL
CEAASNALHR AMGEEAS