Gene Msil_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1146 
Symbol 
ID7093909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1230441 
End bp1230836 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content67% 
IMG OID643464487 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_002361477 
Protein GI217977330 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.00188967 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCTAATCA CACGCAGCGG CTCACAGCCT TCCGGCAAGG GGCCGGCCGA CTGGTTTACG 
GGCGCCGTCC GAATGGACCC GCTGTTCAGT GCGCCCGATC CGGCGCGCGT CGCCGGCGCC
AGCGTCACTT TTGAGCCCGG CGCGCGCACC GCCTGGCACA CGCATCCTCT CGGTCAGACC
CTGATCGTCA CGGCCGGCTG TGGCTGGGCG CAGCGCGAGG GCGGACCGGT CGAGGAAATC
CGCCCCGGCG ACGTGATCTG GTTTTCGCCG GGCGAGAAAC ATTGGCACGG AGCCACGCCG
ACGACGGGGA TGACCCATAT CGCCATCCAG GAAAAGCTTG ACGGCAAGAC TGTCGACTGG
CTGGAACATG TCAGCGACGA TCAGTACCGG ATGTGA
 
Protein sequence
MLITRSGSQP SGKGPADWFT GAVRMDPLFS APDPARVAGA SVTFEPGART AWHTHPLGQT 
LIVTAGCGWA QREGGPVEEI RPGDVIWFSP GEKHWHGATP TTGMTHIAIQ EKLDGKTVDW
LEHVSDDQYR M