Gene Msil_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1118 
Symbol 
ID7093880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1206736 
End bp1207611 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content67% 
IMG OID643464458 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002361449 
Protein GI217977302 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.545883 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTCTTC CCCTCATTGA ACGCGCGCCG GCCAAGATCA ATCTCACTTT GCATATCCTT 
GGCCGCCGCG CCGACGGATG GCATGAGCTT GAGAGCCTTG TCGTCTTTTC CCGCACGGGC
GACCAGCTCT CGCTGATCGA AGGCGAGCCT TTGTCGCTGA CGATCGAAGG GCCGACGGCG
CCGGCGGCAG GCGAGGTCGC CGACAATCTC GTGCTGCGCG CCGCACGTCA TTTCGCTGCG
GCGATCCCCG ACGCCCATCT TGGCGCTTTT CATCTGGTGA AGCGTCTGCC GGTCGCGGCC
GGGATCGGCG GCGGCTCATC CGACGCCGCC GCAGCGCTGC GGCTGCTGGC CCGCGCCAAT
GGCGTTCCGC CCGACGACGA AAGGCTGATC GCCGCCGCGC GCAAAACGGG AGCCGACGTT
CCGGTTTGCC TGGCCGCTCG GGGGCGCATC ATGCGCGGCT TTGGCGACGA GCTTGGCCCG
GTCCTCAAGC TGCCGCCGCT CGTCGCGCTC ATCGTCAATC CGAATGAGCC GCTGGAGACG
CGGCGCGTGT TCGAGCGAAT GGATATCGCG CCCGGCGCCC GCACCGATTT CGGCGGCCAT
CCCAAGCTTG CCTCGGGCAT GGGGCCGGAA GAGCTGATCG CGGCTCTCGC CAAAGGCCGC
AACGACATGG AGCCGGCGGC CTGCCGGCTT GCGCCGATCA TCGGCGACGT GCTCTCGATT
CTCGGCTCAG CGCCCGGCGC AAAACTCGCG CGTATGTCAG GCTCGGGCGC AACCTGCTTC
GCTTTGTTCA AGGATTGCAA ATCCGCCGCC CGGGCGCGCA AGGCAATTTT GCGCGCTCAT
CCGCGCTGGT GGGTCAAAAG CTGCGTCTTG AACTGA
 
Protein sequence
MPLPLIERAP AKINLTLHIL GRRADGWHEL ESLVVFSRTG DQLSLIEGEP LSLTIEGPTA 
PAAGEVADNL VLRAARHFAA AIPDAHLGAF HLVKRLPVAA GIGGGSSDAA AALRLLARAN
GVPPDDERLI AAARKTGADV PVCLAARGRI MRGFGDELGP VLKLPPLVAL IVNPNEPLET
RRVFERMDIA PGARTDFGGH PKLASGMGPE ELIAALAKGR NDMEPAACRL APIIGDVLSI
LGSAPGAKLA RMSGSGATCF ALFKDCKSAA RARKAILRAH PRWWVKSCVL N