Gene Msil_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1090 
Symbol 
ID7093852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp1177117 
End bp1177806 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content69% 
IMG OID643464430 
Producthypothetical protein 
Protein accessionYP_002361421 
Protein GI217977274 
COG category[S] Function unknown 
COG ID[COG5451] Predicted secreted protein 
TIGRFAM ID[TIGR02301] conserved hypothetical protein TIGR02301 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCGC GAGCCGGCCG GGACATGACG CTTAGCAGCA GGAGACCGCA AATCGGGACG 
GCGCCTTCTT TGGCTGCGGC GCTTGTCCTT GCGGCGGCGC TTGCGCTGCT TCCGGCCGCC 
TCGCCGTCGG CGGGCGCGCA AGAGGCCCAG CAAAACGGCC TCCCCTTTCC AATGCCTTGG 
TTCGCGCCGC CCGCGCCTGC GCCCGCTCCC GCGCCGGCCA AGGCGCCAAA GCACACAAGA 
CCCGCGCCGA AACCGAAGCG AGAGGCCAAG CCCGCCGCCG CGCCCAAGAC CGAAACCGCG 
AAGGGCGCGC CCGCCCCGAC TGAGGCTGGC AAAGCCGCGA ACGCCAAAGC CGATCCGGCC 
GCCCCCGCAA CGGCGACGCC CGAAGCGCCG CCGCCGCCCT ATGAGCCGCA GGTCCTGCGG 
CTCGCCGAAA TTCTCGGCGC GCTCGCCTAT CTCGACGATC TCTGCGGCGC CAAGGACGAT 
TGGCGCAAGA AGATGCAGGA TTTTCTCGAG GCTGAAGCCC GGAGCGAGGA CCGCAAGGAG 
CGGCTCGCCG GGGCGTTCAA CCGCAGCTTC CATGATTATG AGCAATCCTA TCAAGCCTGC 
TCGCCCAATG CGCAGATCGT CATCAGCCGC TTTCTGAGCG AAGGCGGCAA GCTCGCGCGC 
GATGTCGCGA ACCGCTTCAG CGCCTCCTGA
 
Protein sequence
MPSRAGRDMT LSSRRPQIGT APSLAAALVL AAALALLPAA SPSAGAQEAQ QNGLPFPMPW 
FAPPAPAPAP APAKAPKHTR PAPKPKREAK PAAAPKTETA KGAPAPTEAG KAANAKADPA 
APATATPEAP PPPYEPQVLR LAEILGALAY LDDLCGAKDD WRKKMQDFLE AEARSEDRKE 
RLAGAFNRSF HDYEQSYQAC SPNAQIVISR FLSEGGKLAR DVANRFSAS