Gene Msil_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1022 
Symbol 
ID7091850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp1109270 
End bp1109737 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID643464361 
Productaspartate alpha-decarboxylase 
Protein accessionYP_002361353 
Protein GI217977206 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.00052962 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAAAAC TGGTTGGCGG CAAGCTGCAC GGCATCCGCG TCACGGAATC GAACCTCGAA 
TACCACGGCT CGATCACGCT CGATCCCGCC CATTGCGAAG CCGCGGGCAT TCTCCCGCTC 
GAATTCGTCG AGATCTGGAA CAAGAACTCC GGCGCGCGCA TCACGACCTA TGTGATCCTC 
GGGCAGCGCG GCTCGCGCTG CTGCGTGCTG AACGGGGCCG CGGCGCGCAC CTGCCAGCCG 
GGCGACGAAT TGATCATCTG CAGCTCGGTC TATCTCGACG GCGCCGAGAT CACGAACCTC 
AGCCCCGCGG TCCTCACCTT CGACGCCAAC AATAATATCG TCGAGAGGCT GCATTATTCC 
GTCACCCGCG ACGGCGCCGG CCATTATCAA TTCGGCATCG TCGCCGAGGA CGGCGAAATT 
CTGCAGCCGC CGCTGAAATC CGGCATGCGG CAGAAGCGGG CGAGCTGA
 
Protein sequence
MRKLVGGKLH GIRVTESNLE YHGSITLDPA HCEAAGILPL EFVEIWNKNS GARITTYVIL 
GQRGSRCCVL NGAAARTCQP GDELIICSSV YLDGAEITNL SPAVLTFDAN NNIVERLHYS 
VTRDGAGHYQ FGIVAEDGEI LQPPLKSGMR QKRAS