Gene Msil_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1013 
Symbol 
ID7091841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp1100172 
End bp1100741 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content58% 
IMG OID643464352 
ProductHNH endonuclease 
Protein accessionYP_002361344 
Protein GI217977197 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0063565 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACGGTCC ATTTCCATGC TACTGCTTCG CCGGAAGCGT GTCCGGCCCT TGTACTCAAC 
GCCGACTTCC GGCCGCTGAG CTACTATCCT TTGTCGCTCT GGTCCTGGCA GGACGCGATC 
AAAGCGGTGT TTCTGGATCG CGTCAATATC GTCTCGAATT ACGACAAGGC GGTGCGAAGT 
CCGAGCTTCG AAATGCTGTT GCCCTCGGTG GTTTCGCTCA AGACCTATAT AAAACCGTCC 
CGCCATCCCG CCTTTACCCG ATTCAATGTC TTCCTGCGCG ACCGCTTCAG CTGCCAATAT 
TGCGGGTCCC GTCAGGATCT GACCTTCGAT CATGTGACGC CCCGCTCCAA GGGGGGCATG 
ACGACCTGGG AAAATGTCGT CGCCGCCTGC TCCAGCTGCA ATCTGCGCAA GAGCGACAGG 
CTGCCCGGCG AAGCCCGCAT GTGGCCGGCG CACAAGCCCT ACCAGCCCAC CGTCAACGAT 
CTGCACCAGA ACGGCCGGCT GTTTCCGCCG AATTATCTGC ACGATAGCTG GATGGATTAT 
CTTTACTGGG ATTCCGAACT GGAGCCGTGA
 
Protein sequence
MTVHFHATAS PEACPALVLN ADFRPLSYYP LSLWSWQDAI KAVFLDRVNI VSNYDKAVRS 
PSFEMLLPSV VSLKTYIKPS RHPAFTRFNV FLRDRFSCQY CGSRQDLTFD HVTPRSKGGM 
TTWENVVAAC SSCNLRKSDR LPGEARMWPA HKPYQPTVND LHQNGRLFPP NYLHDSWMDY 
LYWDSELEP