Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0969 |
Symbol | |
ID | 7093648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1054489 |
End bp | 1055406 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643464308 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002361300 |
Protein GI | 217977153 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.00256112 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTGC GCGACCTTCG CTACATCATC AAAGTCGCCG ATCTCAAACA TTTTGGCCGC GCCGCCGCCG CCTGCCACGT CAGTCAGCCG ACGCTGAGCG GCCAGATCCT GAAGCTTGAG GAAGAGCTCG GCGTCGCCAT TTTCGAGCGC GTTGGCAAAT CGCTGACGAC GACCGCCGCT GGCGACCTCA TCCTTGCCCA TGCGCGACGC GCGGTCGCCG CCGCCGACGA CCTTCTCGCC TGCGCCAAGG CGAGCCGCGA TCCGATGCTG GGCCCCCTGC GCCTTGGCGT GATCCCGACG CTCGCGCCTT ATCTGATGCC CTTCGTGCTG CCGCTTGCGA GAGCGGCCAT GCCGCTGACG CCGCTGGCGC TGGTCGAGGA TCTGACCGAG CGGCTGATCG ACCTCGTCGC CCAAGGCGAG CTCGACGCGG CGCTGATCGC CTCCGACCCC GATAATGAGG CGCTGTCGAT CATCGAATTA TTCGAAGAGC CATTTTTCCT CGTGCTCGCG CGCGACAATC CGCTCGCGGC GCAAAATGAA GTGAACGCTG CGGCGATCGA CCCGCAGCAG CTGCTTCTGC TCGCCGACGG CCACTGCTTG CGCGATCAGG CGCTCGACCT CTGTTCGAGC CCGCGGCGCA ACGAAGGCGA TTTGACCGAC ATGCGGGCGA CCAGCCTGCA GACGCTGCTT CATATGGCGG CGGCGGGCTA TGGCATGACG CTGATCCCAG CCCTGGCGCT GATCGAGGAG CCGCGCCTGC CCGGCGACCT GACGGCGCGC CGGCTGACCG GGCCGCATAC GTCGCGGACG ATTCGTCTGG TGTCGCGGCC GACCCATCCG CGCCGCGTAG CCATCGACGA ATTGGCGCGG CTGATCGTCA AGGGCATTCC GGACAAGCTG ACCGCCCTGT CAAAATGA
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Protein sequence | MNLRDLRYII KVADLKHFGR AAAACHVSQP TLSGQILKLE EELGVAIFER VGKSLTTTAA GDLILAHARR AVAAADDLLA CAKASRDPML GPLRLGVIPT LAPYLMPFVL PLARAAMPLT PLALVEDLTE RLIDLVAQGE LDAALIASDP DNEALSIIEL FEEPFFLVLA RDNPLAAQNE VNAAAIDPQQ LLLLADGHCL RDQALDLCSS PRRNEGDLTD MRATSLQTLL HMAAAGYGMT LIPALALIEE PRLPGDLTAR RLTGPHTSRT IRLVSRPTHP RRVAIDELAR LIVKGIPDKL TALSK
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