| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0499 |
|---|
| Symbol | |
|---|
| ID | 7091232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 555355 |
|---|
| End bp | 556386 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643463829 |
|---|
| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
|---|
| Protein accession | YP_002360833 |
|---|
| Protein GI | 217976686 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.377757 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG CAAAATCGGT CATTGAGGCG ATCGGCAACA CGCCTCTCAT CAAATTGCGG
CGGGCATCGG AAGAGACCCA GTGCCTCATT CTGGGGAAGG CGGAATTCCA AAACCCCGGC
GGCTCCGTCA AGGATCGGGC CGCGCTTGCA ATCGTCGCCG ACGCCGTGGC GCGCGGCGCG
CTGAAGCCGG GCGGAGTCAT TGTTGAAGGC ACGGCAGGCA ACACGGGCAT CGGTCTCGCC
CTCGTCGCCA ATGCGCTCGG CTATAAGACC GTGATCGTCA TTCCCGAGAC GCAGAGCCAG
GAAAAGAAGG ATCTGCTACG GCTGCAGGGC GCGGAGCTCA TCGAGGTTCC GGCGGTCCCC
TATGCGGATC CGAACAATTA CGTGAAATTA TCGGGCCGTC TCGCCGAACG CCTAGCCAAG
GAAAATCCCG CAGGCGCCAT TTGGGCCAAT CAATTCGACA ATGTCGCAAA TCGCCAGGGG
CACTTCGAGA CCACGGGGCC GGAAATATTT GCGCAGACGG ACGGGCGCGT TGACGGCTTC
GTTAGCGCGG TCGGCACCGG CGGGACTTTG GCCGGCGTCG GCATGGCGCT GAAGGCCAAG
AATCCCGGCG TTCAGATCGC GCTCGCCGAT CCGCCGGGCG CGGCGCTTTA TTCCTATTAC
ACGACGGGAG AGCTGAAATC CTCCGGCTCT TCGATCACCG AGGGGATTGG TCAGGGCCGC
ATTACGGCGA ATCTCGAAGG CGCCCCCATC GATTTCGCCT ATCAGATCGG CGATGAGGAA
TCGGTGCGGC TGGTGTTCGA CCTCGCTGAG AACGAGGGGC TTCTGCTGGG CGGCTCGTCC
GGCGTGAATG TTGCGGGCGC GATACGGCTG GCGCGGGAGC TCGGCCCCGG CCACACCATC
GTGACGATCC TGTGCGATTC GGGTTCGCGC TATCAGTCGA AGCTGTTCAA CCCAGAGTTT
CTGCGCTCGA AGAATTTGCC GACGCCCGGC TGGCTGGAGC GCCCGTTGCA GATCAAGCCG
GATTTTCTTT GA
|
|---|
| Protein sequence | MAFAKSVIEA IGNTPLIKLR RASEETQCLI LGKAEFQNPG GSVKDRAALA IVADAVARGA
LKPGGVIVEG TAGNTGIGLA LVANALGYKT VIVIPETQSQ EKKDLLRLQG AELIEVPAVP
YADPNNYVKL SGRLAERLAK ENPAGAIWAN QFDNVANRQG HFETTGPEIF AQTDGRVDGF
VSAVGTGGTL AGVGMALKAK NPGVQIALAD PPGAALYSYY TTGELKSSGS SITEGIGQGR
ITANLEGAPI DFAYQIGDEE SVRLVFDLAE NEGLLLGGSS GVNVAGAIRL ARELGPGHTI
VTILCDSGSR YQSKLFNPEF LRSKNLPTPG WLERPLQIKP DFL
|
|---|
| |