Gene Msil_0438 details

Gene Information

• Locus tag: Msil_0438
• ID: 7093597
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 479997
• End bp: 481979
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643463768
• Product: cytochrome c assembly protein
• Protein accession: YP_002360774
• Protein GI: 217976627
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1138] Cytochrome c biogenesis factor
• TIGRFAM ID: [TIGR00353] c-type cytochrome biogenesis protein CcmF

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGTCG AAACCGGCCA TTACGCGCTT GTCCTTGCGC TGGCGCTCGC GCTCGTCAAT 
TCCGTGCTGC CGATCTGGGG CTCGCTTGCG GGCGACCGCC GCCTAATGGC CGTCGCGCCG 
CCGGTCGCGA TCATGAGCTT CCTGCTGATC GGCTATTCTT ACTTCGCGCT GACCTATGCG 
CATGTGACGT CTGATTTCTC GCTACTCAAC GTGGTGGAGA ATTCGCATTC GGCCAAGCCC 
CTGATTTACA AGATCAGCGG CGTCTGGGGC AATCACGAGG GCTCGATGCT TTTGTGGGTG 
CTGGTGCTGG CTCTGTTCGG CGCGGCGGTC GCGCTGTTTT CCAGCTCGAT GCCTGAGGAT 
TTGCGCGCCA ATACACTCGC CGTCCAATCC TGGATCAGCG CCGCTTTCGT GCTGTTTATT 
CTTTTGACGT CGAATCCCTT CGCGCGGTTG GGCGCGCCGC CAGCCGAGGG CAACGACCTC 
AATCCGCTGC TGCAGGATCC CGGCCTCGCG ATCCATCCGC CGCTGCTTTA CCTTGGCTAT 
GTCGGGCTTT CGATCACCTA TTCCTTCGCC GCCGCCGCGC TGATCTGCGG ACGCATCGAC 
GCCGTCTTCG CGCGCTTCGT TCGGCCATGG ACGCTCGCCG CCTGGATCTG CCTGACGCTC 
GGCATCGCAA TGGGGTCATA CTGGGCCTAT TACACGCTCG GCTGGGGCGG CTTCTGGTTC 
TGGGATCCAG TTGAAAACGC CTCGCTGATG CCTTGGCTCG CCGCTACCGC GCTGCTCCAT 
TGCACAAGCG TCATGGAGAA GCGCGAGGCG CTGAAGATCT GGACGATTTT CCTCGCGATC 
CTCGCCTTTT CGCTGTCGCT GGTCGGCACC TTCCTGGTTC GCTCCGGCGT GCTCACCTCG 
GTGCATGCTT TCGCCACCGA TCCGATGCGC GGCGTGTTCA TTCTCTTGAT TCTTGTGCTG 
TTTATCGGCG GTTCGCTGGT TCTGTTCGCG GCGCGCGCGG GCGGCCTGAA GCAGGGCGGG 
CTGTTCGCCC CGATCTCCCG CGAAGGCGCG ATCGTCGTCA ATAATCTGAT CCTCTCGACC 
TGCTGCGCCA CCGTCTTCGT CGGCACGCTC TATCCGCTCG CCCTCGAGGC GATGACGGGG 
GAAAAGATCT CGGTCGGCGC GCCCTTCTTC AATCTGACCT TTGTTCCGCT GTTCGTCCCG 
CTGTTCATCC TGATGCCGGT CGGCCAGATG CTCGCTTGGA AGCGCGGCGA TCTGCTCGGC 
GCGGCGCAAC GGCTGATCTA CGCCTTCGGC GCCGGCCTTC TGATGGCGGC GGCGCTGGCG 
GCGATCCACG GCGGTCCGGC CGTCAGCTTC ATCCTTGGCG GTCTCGCCGC CTATGTCATC 
GTCGGCGCCT TCACCGATAT CGGCAGGCGC CTCATTAGCG CCGGCGCGTC GCCCGCCTTG 
ATGCTGCGGC GCCTGTCGGG GCTGCCGCGA CAGGCGTTCG GAACGGCCTT CGCCCATGCG 
GGCATCGGCG TCACGCTGCT CGGCCTTGCG GCCTCCGGCT GGGGCGTCGA AAAGATCACC 
ACCTTGCGTC CGGGCGATTC GCTCGACGTC GGGCCGTTTC AATTGACGCT GCAGGAGATC 
GCCAAGCGCG AGGGGCCGAA TTACTCGGAG ATTTTTGCAA CGACGGTGAT CCGCTCCGGA 
GGCGTCGTCG CCGCTGTGGT CGAGCCATCG CTGCGCTCCT ATCCGACCCG GCGCAGCAAC 
AGAACGGAAG CCGGCATCGC CACGCTTTCT TTGGGCCAAG TCTATATCAG CATCGGCGGC 
CTCGAACCCG ACGGCAGAGT CGACGCGCGT ATTTTCTGGA AGCCGCTCGT CTCGCTGATC 
TGGGGCGGCG CGCTGATCAT GGCCTTCGGC GGCGCGCTGT CTTTAAGCGA CATGCGGCTT 
CGCGTCGGCG TCGGCCGCCG CGCGCGAAAG CCGGTCGCGC CGCAAGCCGC GCCGGCGGAA 
TGA 

 

Protein sequence

MIVETGHYAL VLALALALVN SVLPIWGSLA GDRRLMAVAP PVAIMSFLLI GYSYFALTYA 
HVTSDFSLLN VVENSHSAKP LIYKISGVWG NHEGSMLLWV LVLALFGAAV ALFSSSMPED 
LRANTLAVQS WISAAFVLFI LLTSNPFARL GAPPAEGNDL NPLLQDPGLA IHPPLLYLGY 
VGLSITYSFA AAALICGRID AVFARFVRPW TLAAWICLTL GIAMGSYWAY YTLGWGGFWF 
WDPVENASLM PWLAATALLH CTSVMEKREA LKIWTIFLAI LAFSLSLVGT FLVRSGVLTS 
VHAFATDPMR GVFILLILVL FIGGSLVLFA ARAGGLKQGG LFAPISREGA IVVNNLILST 
CCATVFVGTL YPLALEAMTG EKISVGAPFF NLTFVPLFVP LFILMPVGQM LAWKRGDLLG 
AAQRLIYAFG AGLLMAAALA AIHGGPAVSF ILGGLAAYVI VGAFTDIGRR LISAGASPAL 
MLRRLSGLPR QAFGTAFAHA GIGVTLLGLA ASGWGVEKIT TLRPGDSLDV GPFQLTLQEI 
AKREGPNYSE IFATTVIRSG GVVAAVVEPS LRSYPTRRSN RTEAGIATLS LGQVYISIGG 
LEPDGRVDAR IFWKPLVSLI WGGALIMAFG GALSLSDMRL RVGVGRRARK PVAPQAAPAE