Gene Msil_0414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0414 
Symbol 
ID7093573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp456190 
End bp456804 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID643463744 
ProductColicin V production protein 
Protein accessionYP_002360750 
Protein GI217976603 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.728843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCT ATCTCGACCT AGGCTTGATC GTCGTCATCT TGGTCTCGGC CTTGCTCGCC 
ATGCTTCGCG GTTTTACGCG CGAGGTTTTG GCCATCGCCT CCTGGGGCGC GGCGGCGGTC 
GCCGCGATCT ATCTGCACCC CTTGGTACTG CCCTACATCA AGCCCTATGT CTCGAAGGAC 
GTGATCGCGC TCGCCCTTTC CGCCGCCGCC GTGTTCTTTG TGACGCTGAT CATCGTCTCG 
CTGATCACCA TCAAATTTTC CGACGCGATT CTTGATTCCA AGGTCGGGGC GCTCGACCGT 
TCGCTCGGCT TCGCCTTCGG GGCGGTGCGC GGCCTGTTGC TTTGTGTGAT CGCCTTCATC 
TTCTTCAATT GGCTGGTGCC GGAGAAAACC CAGCCGGAAT GGGTCAAGGC CGCAAAAATG 
CGCCCGTTGT TACAGGCGAC GGGCGATCAG CTGATGGCCA TGCTTCCCGA CGATCCGGAG 
GGCATTCTCG CCAAGCTGAA GCAGCCCAAA GCTGCTCCCA GCGAGGAGGC GGCGCCCGAC 
GCCGACGTCG AACCCAAACC CGCCCCTGCA GCCCCGGCAG CGCCGCCGCC AAAGCCCCTC 
GGCAAGAAGA GCTGA
 
Protein sequence
MPSYLDLGLI VVILVSALLA MLRGFTREVL AIASWGAAAV AAIYLHPLVL PYIKPYVSKD 
VIALALSAAA VFFVTLIIVS LITIKFSDAI LDSKVGALDR SLGFAFGAVR GLLLCVIAFI 
FFNWLVPEKT QPEWVKAAKM RPLLQATGDQ LMAMLPDDPE GILAKLKQPK AAPSEEAAPD 
ADVEPKPAPA APAAPPPKPL GKKS