Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0185 |
Symbol | |
ID | 7090502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 189532 |
End bp | 190737 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643463519 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002360528 |
Protein GI | 217976381 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 0.73097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAGGAC AGAGCAGCGC CCAGAGCGCC ATGAACGAGG CGCTCCTCGC TAGCCCCTCC GGGGCGCGCC GCACCCTCGC CGTCGCCGGA ACGGCGCATG CGCTGCACGA TGGCTATACC GACCTGATTT ACATCCTGTT GCCGGTCTGG CAGGCCGAGT TCGCGCTTGG CTTTGGCATG TTGGCCCTGC TGCGCGCGCT CTACGCCGCC AGCATGGCGG CGCTGCAGGT TCCGGTCGGG CGTCTCGCCG AAAGATGGGA CGGCCGAATC ATTCTAGCGC TCGGCACGGC GCTGTCGGGG ATCGGCTACG CTCTCGCCGG CGCCTCCGGC GGCTTGCTCG GCCTCTGCGC CGGGCTCGCC CTCTCCGGCG CGGGCTCCAG CACGCAGCAT CCGATCGCCT CGGCGGCCGT ATCGCGCGCC TATGGCAAAG CTTCGCGCGG GCCGCTTGGC GTCTATAATT TTTCGGGCGA TCTCGGCAAG GCGGCCATTC CCGCCCTGAC CTCGCTGCTG CTCATCTTCA TGTCCTGGCG CCACGCGCTC TGGCTGCTCG CCCTTATCGG CGCCGCGACG GCGATTGCGA TCGCCGCTTT CATGCCGCCG ATCGCCGGGG GCAGCAAGGC GGGCGACCGA CGGGAACAGA GGGGCAGCGG GCGCGGCGGC TTTCCGCTGC TGTTTGCGAT CGGCGTCCTC GACACCGGCG TGCGGATGGG CTTTCTGACC TTTCTTCCCT TTATTCTCAA GGCTCATGGG GCCTCGCTGC CGACCGTTGG CGTCGCCCTG GCTTTGGTCT TCATTGGCGG CGCCGCGGGC AAATTCACCT GCGGCTGGCT TGGCGCGCGG ATCGGCGTGC TGCGGACGGT GCTACTGACC GAGGGCGGGA CGGCCGCCGC CATTCTGGCC GTTCTGATCC TGCCGCTTCC GGCGATCCTC GTCTTGCTGC CGCTGCTCGG AATCATGCTG AACGGCACCT CATCGGTGCT TTATGGAACG GTTCCGGAGC TGACGCCGCC TCATCGAGTC GAGCGGGCCT TTGCGCTGTT TTATACCGGC ACGATCGGGT CGGGAGCCGT CTCGCCGATT TTCTATGGCG TGCTCGGCGA CGCCGTCGGG GCGAATTGGG CGGTCGTCGC CACAGCCATG GTTGCGCTTT CTATCTTTCC GCTGGCCCTT GCCCTTGCGC CCCATCTCCG GCCGGGGCCG CGATAG
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Protein sequence | MTGQSSAQSA MNEALLASPS GARRTLAVAG TAHALHDGYT DLIYILLPVW QAEFALGFGM LALLRALYAA SMAALQVPVG RLAERWDGRI ILALGTALSG IGYALAGASG GLLGLCAGLA LSGAGSSTQH PIASAAVSRA YGKASRGPLG VYNFSGDLGK AAIPALTSLL LIFMSWRHAL WLLALIGAAT AIAIAAFMPP IAGGSKAGDR REQRGSGRGG FPLLFAIGVL DTGVRMGFLT FLPFILKAHG ASLPTVGVAL ALVFIGGAAG KFTCGWLGAR IGVLRTVLLT EGGTAAAILA VLILPLPAIL VLLPLLGIML NGTSSVLYGT VPELTPPHRV ERAFALFYTG TIGSGAVSPI FYGVLGDAVG ANWAVVATAM VALSIFPLAL ALAPHLRPGP R
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