Gene Msil_0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0020 
Symbol 
ID7092348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp19780 
End bp20112 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content61% 
IMG OID643463353 
Productflagellar motor switch protein FliN 
Protein accessionYP_002360365 
Protein GI217976218 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATG CGCAGATTGA AGTGAATGAA ACGGTTGGCG GCGGCGAGGA GCCGCCGGGC 
CGCGCCAACG TAAGCCGCAA TCTCGAGACG ATCCTGCGTA TTCCGGTCGT CGTTCAGGTC
GTGCTCGGCT CCGCGGTCAT GCCTGTGTCT CATCTTCTGA AGCTCGGGCG CGGCGCCGTC
ATTCCGCTCG ATCACAGAGT AGGGGAGCCA GTCGACGTCG TCGTCAACGG ACGCATCATC
GCCCGGGGCG AAATTGTGGT TGTCGAGGAT GATAATTCCC GCTTCGGCGT CTCGCTGACG
GAAATCGTCG GGCCTGTTGG ATCGGCGGAT TGA
 
Protein sequence
MSDAQIEVNE TVGGGEEPPG RANVSRNLET ILRIPVVVQV VLGSAVMPVS HLLKLGRGAV 
IPLDHRVGEP VDVVVNGRII ARGEIVVVED DNSRFGVSLT EIVGPVGSAD