Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2271 |
Symbol | |
ID | 5104223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2172501 |
End bp | 2172938 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640508168 |
Product | hypothetical protein |
Protein accession | YP_001192333 |
Protein GI | 146305017 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.742952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCT CAAAAAGAAT CGTAGCTGAC ATGAATTCAC TACTGGATAA AACAGTGGTG GTCAAACTAA GTAATGGTAA GAGCTATTCA GGCCAGTTAT CCTCGTACGA ACTGACTCCA TTCATGGTAA GCCTAATTAA TGCTAAGGAT AGTGAAAATA ATTCCTTCTA CAAGGTTCTG ATAAATGGCA ACATGATATC GGAGATTTTA GTCAAGTCAG TTCCGATTTT CGATGCCAGA GAGTTCGCTG ATGTGGTCCA GAAAAACCTA GGTCTTAGAC CAGGTGACGT GAAGGTGTAT GAGGAAGTTG GAATTATTAC AGTAATGGAG AGAATCAAGG TATCCGAAAG CGGAGTTGAG GGCAGCGGTC CCATGGCTCA GAGAATATAC GACCTTTACA ACGAGTATAT TGCTAAGAAG AAAGGAGACA CGAAATGA
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Protein sequence | MSASKRIVAD MNSLLDKTVV VKLSNGKSYS GQLSSYELTP FMVSLINAKD SENNSFYKVL INGNMISEIL VKSVPIFDAR EFADVVQKNL GLRPGDVKVY EEVGIITVME RIKVSESGVE GSGPMAQRIY DLYNEYIAKK KGDTK
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