| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2267 |
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| Symbol | hisS |
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| ID | 5104219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2168940 |
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| End bp | 2170232 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640508164 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001192329 |
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| Protein GI | 146305013 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.921097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.960691 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTATCCT ATGAGCCTAT GCGCGGGATG GAGGATTATT TTGATGTGGA TTCAAAGATC
ATTAGGTGGA TAGAGAGCAA TTTTAGGGAA ACTGTAGAGA AAGCAGGTTA TAAGGAGGCC
ATGACCCCAA TTGTCGAGGA CTTTGAACTG TTTTCCCTTA AGGGTGGAGA GGAACTAAGG
AACACGATGT ACGTGTTTAA GGATAAGGGG GAGAGAGAAG TGGCTCTAAG ACCTGAGATA
ACTCCCAGTA TCGTGAGGTT ATATCTTAAT TCTTTACAAC ATTATCCAAA ACCCCTAAGA
ATTTTCTATA TAGGGAGGGT ATATAGGTAT GATGAGCCTC AACAGGGCAG ATATAGGGAA
TTTAGGCAAG CAGGGGTTGA ATTACTAGGC TCGGATTCTA TTCTAGCCGA CATAGAAGTT
CTCCATCTCT TAGAAAATTT CTATAGAAGA ATAAACCTTA AGGACAAAAT ATCTTTGAAA
ATAAATAATA TAGGAATTTT CAGAATAATC TTTAATAAAC TCTCATTTGA TGAGCAAGTT
CAGGAACACC TGTTACACCT TTTGGATAAG GGAAAGATAG AGGAGGCGGA AAAAATCTTA
GATGAGAAGA TACGCGATAA CTCTAAAATA AGACAATTCA TTTATACACT AATTACTAAC
GGTAGATCAC TCAAATTAGA AGAGGCAATG AGGGAGGCAG AAAAGACAGA ATTGTCTGAA
CTTGTAAATG AGATAGAGAA TCTAAAACTC ATCTCAGAAA TTCTGTCGTC CCTGAATCTT
GACCATATTG TAGATCTTGG TTTCGTTAGA GGACTTGCAT ACTACACTGG CCCTATCTTT
GAAGTGGTGA AAAGAGATCT TCCGTTCAGT ATCGCTGGAG GCGGAAGATA TGACTCGCTA
GTGGAAGTTT ACGGAGGAAA TAGGACGCCT GCGGTTGGAT TTGCCATAGG AATAGAGAGA
ACTATGTATG CACTTAACAA AGATGGGATT AAATTCGACT CCAATGCCCC ATTGGTAGCT
GTTGTAGCCT TAGACAGGTC AGTTATCCCC CATGCGCTTT CCATAGTTTC CATGCTCAGG
GACAAGGGGT TCATAACTGT GCTAAACAAC AAGGAGATTC CGCTATCAAA ACTCGTACCC
CTATATGCCG AACAGGGATT TACACATCTA ATCATCATGG GGCAAAAAGA AATCACTTCA
GGGAAAGTCA CTGTTAGGAA CCTTGTTAAA AGGGAACAGA TAACAACTGA TGTAAAGGAG
TTAACGAACG TGATTACTGC TCCCGATAAA TAA
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| Protein sequence | MVSYEPMRGM EDYFDVDSKI IRWIESNFRE TVEKAGYKEA MTPIVEDFEL FSLKGGEELR
NTMYVFKDKG EREVALRPEI TPSIVRLYLN SLQHYPKPLR IFYIGRVYRY DEPQQGRYRE
FRQAGVELLG SDSILADIEV LHLLENFYRR INLKDKISLK INNIGIFRII FNKLSFDEQV
QEHLLHLLDK GKIEEAEKIL DEKIRDNSKI RQFIYTLITN GRSLKLEEAM REAEKTELSE
LVNEIENLKL ISEILSSLNL DHIVDLGFVR GLAYYTGPIF EVVKRDLPFS IAGGGRYDSL
VEVYGGNRTP AVGFAIGIER TMYALNKDGI KFDSNAPLVA VVALDRSVIP HALSIVSMLR
DKGFITVLNN KEIPLSKLVP LYAEQGFTHL IIMGQKEITS GKVTVRNLVK REQITTDVKE
LTNVITAPDK
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