| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2241 |
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| Symbol | |
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| ID | 5104302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2145486 |
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| End bp | 2146016 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640508134 |
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| Product | DNA-directed RNA polymerase subunit E' |
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| Protein accession | YP_001192303 |
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| Protein GI | 146304987 |
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| COG category | [K] Transcription |
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| COG ID | [COG1095] DNA-directed RNA polymerase, subunit E' |
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| TIGRFAM ID | [TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.270125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00212612 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAAAG TTGTAAAGGC CAGAGGAGTT GTTAGAATAC CACCCGAACT CTTTGGCGAA
CCCTTAAACA AAACAGCCAT TGAGATACTT AATAATGAAT ATAAGGAAAG GTTATTTAAA
GATTTAGGTC TAGTTCTGTC TGTTATTAGG GCTGACGTAA ATGAAGAGGG GATGATTATA
TTCGGTGACG GGGCAACTTA TCATGAGGTG GAATTTGAGC TCCTGACTTT CTCGCCCATG
ATTCAGGAAG TTATAGAGGG CGACATTACT CAAGTAGATA ATTACGGGAT ATATGTAAAC
ATGGGTCCCA TGGACGGTCT CGTGCATGTA TCTCAAATCG GGGATGATAA TTACAAATTT
GATTCTGTTA GGGGAATTTT AATTGGGGAG AAATCAAAAA AGACTTTTCA AAAGGGGGAT
ATGGTTAGGG CTAGAATAAT GACCATTTCC TCCACTGCTA GCAATAGGCT ACCAAGGATT
GGATTGACCA TGAGACAGAT GGGTCTAGGA AAGGTGGAGA GGAGGAACTG A
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| Protein sequence | MFKVVKARGV VRIPPELFGE PLNKTAIEIL NNEYKERLFK DLGLVLSVIR ADVNEEGMII
FGDGATYHEV EFELLTFSPM IQEVIEGDIT QVDNYGIYVN MGPMDGLVHV SQIGDDNYKF
DSVRGILIGE KSKKTFQKGD MVRARIMTIS STASNRLPRI GLTMRQMGLG KVERRN
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