Gene Msed_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2222 
Symbolrps24e 
ID5104283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp2129114 
End bp2129455 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content43% 
IMG OID640508115 
Product30S ribosomal protein S24e 
Protein accessionYP_001192284 
Protein GI146304968 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2004] Ribosomal protein S24E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000329506 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGCAGG CACAACAGAT CAAGGTCTCT GACAAGGCTG AAGCCTTAGT TGAGAATTTG 
AAGGAGAATA AGGTAATCGG GAGAAAAGAG ATCAAGATAA AGGTTTACCA CATAGGTAGT
CCAACTCCCT CTAGGGCTGA TATAAGGAAA GCCATTTCAA GTTTCATAGG GGCCAAGGAG
GATTTGGTGG TTATTAGGAA AATAAATACT GGTTATGGAG CCGGAATAAG TGAGGCTACT
ATACACGTAT ACTCCGAGAA GGACGTACTA AGTAAATTTG AGCCAGCTCA TCTAGTTAAT
AGAGGCAATA AAGCCAAGAC TCAAGGTGAG GCCAGTGGCT AA
 
Protein sequence
MSQAQQIKVS DKAEALVENL KENKVIGRKE IKIKVYHIGS PTPSRADIRK AISSFIGAKE 
DLVVIRKINT GYGAGISEAT IHVYSEKDVL SKFEPAHLVN RGNKAKTQGE ASG