Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2129 |
Symbol | |
ID | 5104422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2048480 |
End bp | 2049646 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640508018 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001192192 |
Protein GI | 154819280 |
COG category | [R] General function prediction only |
COG ID | [COG1078] HD superfamily phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000800981 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000761992 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TCCACCCGGC CATAGCGGGG GAGCAACACC CGGACTCATC TCGAACCCGG AAGTAAAGTC CCCTGCGTTG GGGATGCGGT GGGATCCGAA AGGGCCCGCA GCTACCCCAA GCTGGGATGG A
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Protein sequence | MKRIFDEVHG SIELDDLSVK LADLPEFQRL RRIRQTSLAY TVYPGANHTR FSHSLGTYYL ADKIGNKLLK EGAITGEELT LVKISALIHD LGQFPFSHAI ESFYITKGLG NKELRDLILK SHISDILDDY GIDHKKVRDL LNGTSMLTSV IDGDVDVDRM DYLIRDSTHT GIQLGRIDLD RLIFTISYRE NGISIQDKGI ISLENFYLSR LHMYQAVYYH KTILGYELFL RSIYSKLLEE CETRLEVEDI KEMIERGTFP YWDDEWVFGS LYRCYSANPN STTSQMIKDF LDRRGPKVVY EEISYDNEKD TKFNEVTDRL ARHIPQDSLY PFEEKISILD KSRIRVMTKD REIDLDGYPT LLRSIPERLI IRRVYVDRRF VNRAREII
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