| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2082 |
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| Symbol | |
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| ID | 5105062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2000465 |
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| End bp | 2002267 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507972 |
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| Product | AAA ATPase |
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| Protein accession | YP_001192146 |
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| Protein GI | 146304830 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0433] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.901274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGATG AACTCTACAA GGGCATGAAG GAGAGAACCA GTAGGGCCAG AGCCTTGGCA
GTAAGCCTAG GGAAGATGAT AGGAAAGATT TCCAAGTATA TGCCAAACAG GATAGACCAG
GAGAGCCTTT ACGTAAACGC AGTAGTTGAT GCTGAAACGT ATTACTCTAA CGAATACCTT
GGTAGGATGG GAATCCTTCT GGGTGCAGTG GACATTAGAA CTCTAGAGTT CATACTGCTT
CAAGTTGTTG GGTATGAGAG AAGTGATATC ACGTCATCGC TGTTCAACTC AACTGACATC
ACTCCAAAAC TGGTTGAGGA CGACGATCCA GGAACCCTGA TAGGAAACGT TATACTTAAG
TGCGAGATGC TCACTAGACT TGACCCTCTC GGTAGAGGGG AACCTGTGCC CGCGGACATA
ATACCTGAAC CCCAGTCACC CGTGATAATC CCCTATCCTG AGATGGTCGA GAGGGCCATG
GGGATCAATC GCGGGAAATT GAAACTTGGC TTTCTCGACA TTTCCAACTC CGAGGCAAGG
GTCAGTATCC CTCCTGAGGA GTTGAACTTT CATAGTCTGG TCATAGGCAC CACAGGGGCC
GGGAAGACCT CATTCATTAA GGACGTGATA ACCTCATTGG TCACTACGGT TGAAGACGAA
CAGGTGATCA TCTTTGATGC CACAGGGGAT TATTACCACT CATTCCTCCC ACCTGATTTA
ACCTCAGAAC ATGTTAGGAG AGGGATAGAG GACTTCAATA AGCTGAACGG TCCAGTCAAC
GGGCTACACG AAGATATTCT CTTTCCGATT ACTAGTCGTT GGCTAAGGAA GTATACTCAG
GAGAGAACGG AAGAAGAAAT AACCAAGACC TACTATGATC TCTACATCAA ACCCCTAGTC
AATTACATAG AGAGGAAGGG GATGAAGATT GATGTTCAGA TTAGCGGAAG GAGGATTGAA
CTCGCCTCAG ATTACTGGAA ATCCAGCGCC GAGGTCCACC CCTTCTACCT GTCGTTCAGG
GAAAACAGAC GGATAGTTCA TAAGTTAAAC CCATACTTTA GTGAGCAGGC ATCCCATTTC
CTGAAGATAA TTACCTCTCA ACTGAAGGAC GTCGAGAGCC TGGACGAGTT CATTGAGAAC
ATGAACGAGG AGAACTTTGA GAAACTGCAG GTCCACAAGA GCACGCGTGA AAATATACTT
CGTGGGCTCT ACTTGCTCAG GGAAACTGGA CTTTTTGATC TGCGTTCTCC TAGGACGTCC
TTGGGAGACC TACTTTCCAC CTCTAAGATG TTGACAATTG ACCTCTACAA TCAGGAGCTC
GACGATTTCG CCCAGAAAAT ACTCACCTAC TATTTCCTGG ATAGAATCTT CCAGCTTAGG
GAGAGCAAGA TGAGAAAGGG CGAGATTAAC AGTAAACTGC TCATTATCAT AGATGAGGCC
CATAGGTTCT TTCCGTCAAA CAGAGGAGGG GAGGAGGACA GCAACTACGT GAGAAGGGTT
GCGGGAAAGA TATCTGTAAT GATGAGGTTA GGCCGTAGGA GAAGAATAGG GTTCATGTTC
TCCACTCACA ATCCCTCCGA TCTAAGTGAT ATTATTGTTC AGTTAGCTAA CACCAAGTTT
GTTTTCAGGA CATCTCTGGA CATTGCGGAG AGTTTAGGCG TTCCTAGATC GGAGGGGAAA
ATATTAAGCT GGGAGAGGAA TGGTGTAGCA TATATGATTT CGCCATGGCT GAAACAAGGA
AGATTAAAGG TCAGGGTTCC TGTTCCTCCT CCCATTGGCC ATTACGATCT CTCTAGGACT
TAG
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| Protein sequence | MIDELYKGMK ERTSRARALA VSLGKMIGKI SKYMPNRIDQ ESLYVNAVVD AETYYSNEYL
GRMGILLGAV DIRTLEFILL QVVGYERSDI TSSLFNSTDI TPKLVEDDDP GTLIGNVILK
CEMLTRLDPL GRGEPVPADI IPEPQSPVII PYPEMVERAM GINRGKLKLG FLDISNSEAR
VSIPPEELNF HSLVIGTTGA GKTSFIKDVI TSLVTTVEDE QVIIFDATGD YYHSFLPPDL
TSEHVRRGIE DFNKLNGPVN GLHEDILFPI TSRWLRKYTQ ERTEEEITKT YYDLYIKPLV
NYIERKGMKI DVQISGRRIE LASDYWKSSA EVHPFYLSFR ENRRIVHKLN PYFSEQASHF
LKIITSQLKD VESLDEFIEN MNEENFEKLQ VHKSTRENIL RGLYLLRETG LFDLRSPRTS
LGDLLSTSKM LTIDLYNQEL DDFAQKILTY YFLDRIFQLR ESKMRKGEIN SKLLIIIDEA
HRFFPSNRGG EEDSNYVRRV AGKISVMMRL GRRRRIGFMF STHNPSDLSD IIVQLANTKF
VFRTSLDIAE SLGVPRSEGK ILSWERNGVA YMISPWLKQG RLKVRVPVPP PIGHYDLSRT
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