| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2029 |
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| Symbol | |
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| ID | 5105251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1956292 |
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| End bp | 1957053 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507917 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001192093 |
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| Protein GI | 146304777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.755342 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCTCG ATGCTCACGC TCACGTTGAT GTAAGGGAAT TTGATTCCGA TAGGGATTTG
GTTCTTTCAA GGTGTGATAT CCTTGTTGTG AATGCAGGGG TCGACCTTGC AACCGACTTG
GCAACACTTG AGTTGGCGAG ACGGTATAGA AACGTTGTTC CCGCTATAGG TTTTCACCCC
GAATTCATTG AGAAGGTTGA TCAGGAACTG GAACAGGTAA GGAAGCTGGT GGAGCTCGCC
CCCATAATAA GTGAAGTGGG ACTAGACTAC TTTTGGATTA AGGATGAAGA GTTAAGGAAA
AAGCAGAAAC AGGTACTAGA GGTCTTCATG GAACTGGGGC AGGCCCAGGA TAAACCCTTG
ATAATTCACT CCAGGGGTGG GTTAAGGGAG ATCCTGGACT TGGTCTCCAG TTATAGGGTA
AGGTTTGCCA TTCACGGGTA CGAGGGTAGC ATGAGGGATG CATCTAGGAT TGTGGAATTG
GGCGGATTCC TCTCATTTCC ACCCATCATT GTAAGAGATA AGGGAAGGAG AGAGATAGCT
AGAGTTGTGC ATGAGGATCA CATTCTCACC GAGACGGACT CCCCTTTCAT GGGGCCAGAT
AGGAGCAGAA ATGAGCCTTG CAACGTGAGA ATCACGGTTG ACGCGCTTGT GGAAATAAGG
AAAATGAGAA AAGATGAACT TGAGGAAAAA ATAATGAATA ACTTTAGGAG ATTACTAGGT
CCTCACTTTT CCTCGCTGGG AGCGAATCTA ACGAAGAGAT AA
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| Protein sequence | MLLDAHAHVD VREFDSDRDL VLSRCDILVV NAGVDLATDL ATLELARRYR NVVPAIGFHP
EFIEKVDQEL EQVRKLVELA PIISEVGLDY FWIKDEELRK KQKQVLEVFM ELGQAQDKPL
IIHSRGGLRE ILDLVSSYRV RFAIHGYEGS MRDASRIVEL GGFLSFPPII VRDKGRREIA
RVVHEDHILT ETDSPFMGPD RSRNEPCNVR ITVDALVEIR KMRKDELEEK IMNNFRRLLG
PHFSSLGANL TKR
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