Gene Msed_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_2022 
Symbol 
ID5105244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1950999 
End bp1951484 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content44% 
IMG OID640507910 
Productmolybdopterin-guanine dinucleotide biosynthesis protein B 
Protein accessionYP_001192086 
Protein GI146304770 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1763] Molybdopterin-guanine dinucleotide biosynthesis protein 
TIGRFAM ID[TIGR00176] molybdopterin-guanine dinucleotide biosynthesis protein MobB 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.314325 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTGCA TCTTTCAGAT AGTGGGAAGG AAGGATAGTG GGAAAACGCT GGTAATTGAG 
AGGGCTGTCT CGGCTCTGAA GCGAAGGGGC TTAACTGTGG CTACAGTGAA ACATACCCAT
CACGAGATAA ACCCCAGTAG AAAGGATACT GCACGCTTCA TGAATGCTGG ATCAGATGTG
ACTATACTAC ACAGTAATGA CTGTGCGTTG CTCTGGAGGT GTTCAACCCC AGATTACTTG
GATCTTATCC CGGCAGACGT TGTACTCGTG GAGGGATTCG CTAATAGGGA TTTGGGCAAA
AAAATCGTTG TGAACGACCC CTCTGATGCT GATAGGATAG TGAAGGAGAT TGTAGAGGAG
GCGTCTCAAT GTAAGCTCGA AGCCTCAGTC GAGGTATTTC CTAAACAAAA AGATAAAATG
GTGTACATGA CGCTATATAA GTTAATGAAA AAATGGGGGA TCAAAGAGGT AAAACTTCTT
GATTGA
 
Protein sequence
MDCIFQIVGR KDSGKTLVIE RAVSALKRRG LTVATVKHTH HEINPSRKDT ARFMNAGSDV 
TILHSNDCAL LWRCSTPDYL DLIPADVVLV EGFANRDLGK KIVVNDPSDA DRIVKEIVEE
ASQCKLEASV EVFPKQKDKM VYMTLYKLMK KWGIKEVKLL D