| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1989 |
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| Symbol | |
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| ID | 5103376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1923508 |
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| End bp | 1924626 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507877 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001192053 |
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| Protein GI | 146304737 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATACT GCAAGAGGGG AACTGAAGGG TTAATCTACC TAGAGGACGG AACCCTGTTG
AGGGGTTGTG GCTTCGGCGC TAAGGGAGTG AGGTACGGGG AAGTGGTTTT CACTACGGCC
ATGAACGGGT ATCCAGAGTC CATGACCGAT CCGTCTTACA GGGGTCAGAT ACTTATCATA
ACGCATCCCC TCGTGGGAAA TTACGGTGTC CCAAACCCCA TTGTGAGAAA TGGGATTCTC
CAGAACTTTG AGTCAGAGCA GATCCAGATC GAGGGGCTCG TGGTTACGGA GGAGACTGAT
CCCTCAAAGT GGAACTCTTC CAAGAGCCTT CACCAGTGGA TGGCTGAACA GGGTATTCCA
GGAGTCTCCT CCGTGGACAC TAGACTCCTG GTTAAGAAAG TAAGAACCCT GGGCTCCATG
ATGGGGGTAA TTGCCTCCGG GGAACATGTG GAGGATCCTA GGAAATACAT AGAGATGAGG
TATGACGAGA TAGACTTCAC TAAGTTTACC TCCCCCAAGT CCCCTATCAT CCACCAGAAC
AACTCCCCAG ATATTATTGT GTTAGTGGAC TGCGGAATAA AGCACGGCAT ACTAGAGGAG
CTATACAAGA CTGGCTTCAC CATAGTGAGG GTTCCGTGCA AGTCCAGTGC CGATGAGATC
ATGAACTATT CTCCAAAGGG CATAGTCTTT GGAAACGGAC CTGGAAATCC TAACATCCTG
AAGGATCTAG TGAAGAACTT CTCCGCAGTC ATGGAGTATA AATTGCCCAC CCTTGGAATA
TGCCTTGGGC ATCAAGTGGC AACTCTAGCC TTGGGTGGCA ATGTAAGAAA GATGAAGTTT
GGACATAGGG CAATAAATAA GCCCGTGACG GATATCTCAA ATAACAAGTG CTACATATCT
ACACACAATC ACGGTTATGG AGTATACAAG GAGGACATTC CGCCTGACAC GCAGATCTGG
TTCGTGAATC CAGATGACGG GGTAGTCGAG GGGTTAATAC ACAAGAGACT TCCCCTGATC
ACAACTCAAT TTCACCCGGA AGCTAGGCCG GGACCCAATG ATACGACTTG GGTTTTCCAG
AAGTTTAAGA AGATGGTGAT AAAGGATGAA GGGAATTAA
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| Protein sequence | MTYCKRGTEG LIYLEDGTLL RGCGFGAKGV RYGEVVFTTA MNGYPESMTD PSYRGQILII
THPLVGNYGV PNPIVRNGIL QNFESEQIQI EGLVVTEETD PSKWNSSKSL HQWMAEQGIP
GVSSVDTRLL VKKVRTLGSM MGVIASGEHV EDPRKYIEMR YDEIDFTKFT SPKSPIIHQN
NSPDIIVLVD CGIKHGILEE LYKTGFTIVR VPCKSSADEI MNYSPKGIVF GNGPGNPNIL
KDLVKNFSAV MEYKLPTLGI CLGHQVATLA LGGNVRKMKF GHRAINKPVT DISNNKCYIS
THNHGYGVYK EDIPPDTQIW FVNPDDGVVE GLIHKRLPLI TTQFHPEARP GPNDTTWVFQ
KFKKMVIKDE GN
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