| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1981 |
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| Symbol | |
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| ID | 5103368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1915197 |
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| End bp | 1916537 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507869 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_001192045 |
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| Protein GI | 146304729 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.568591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAA GGGAACACTG TGGAGTTTTC GGGGTTGTCG GGCCTGACTC CACGAAGCTT
ACCTTTGAAG GACTAAAGCT CCTCCAACAT AGGGGTCAGG AATCCGCAGG GATTTCCTGG
ATAGATGGGG ACAGGATACA AACTAGGAAG GGCCTTGGTC TTGTGGGTGA GGCCCTAGAT
CCCAAGGAGA TAGGGGAGTC GCTCTTTTCC ATAGGCCACG TGAGGTACTC AACCACAGGC
TCCACTACCC TACAGGAGGC TCAGCCCCTC GACGACGGCT TCATTGCTGT TTCCTTTAAC
GGTACCATAA CCAACCACTT CCAGAACGGA GACTTTTCCA CTGACACCGA GTTTATCTTG
TCCTTCCTTA GGAACCAGCT GTCTCAAGGG AGAAGCCTGG AGAGCTCCGC GAGGGCATTC
ATGGATGTGG CCGATGGAGC CTTCTCCCTC CTGGTTCTCT CCTCCAAGGG CGAAATTTTG
GCAATGCGGG ATCCGCGTGG CTTCAGACCT CTCGTTATAG GCGAAATAGG GGATAACAAG
GTGGTCTCCT CTGAGGACTC AGCAATCAAG CAGTTGGGTG GAAGGGTCAT CGGTTTCGTT
CACCCAGGGG AGATAATTAA GATAACCAGG GATACAGTGG TCAGGGAGAG GGTCTCCTCC
CTTCCGACGA CTACGTGCGC CTTTGAATAC ATTTATTTCT CTAGAGCCGA TTCAGAGATA
GACGGAATCT CGGTCTATGC ATCCAGAATT AAGTTAGGGG AGTTGCTGGC TAGAAATCAC
CCAGCCAACG GAGATGTGGT AGTGCCTGTG CCAGACTCGT CCAGGCCCAT AGCCCTGGGC
TTCTCTAGGA CCAGCGGTAT ACCCCTAGAG GAGGCACTGG TAAGGACCAT CTCTTCAAAG
AGGTCCTTCA TCATGCCTTC CGACGAGAAA AGGAACGAGG TGCTTAAGGA GAAGTTCGGC
ATTGTGGAGT GGGCCGTCAG GGGAAAGAGG GTTGTACTCG TTGACGATTC CATAGTCCGC
GGGAATACCA TGAAGAGGAT AGTGAACTCG CTTAGAAGCG CGGGAGCGAG GGAGGTTCAC
ATTAGAATTG GATCCCCCAT GATTAGGTTT CCCTGTTACA TGGGAATCGA CTTCCCTAGA
AGATCTGAGC TTGTGGCAAA CATAGGAGAT GAGAGGGCCA TAGCCCGTGA GCTTAACGCG
GATAGCGTCG AGTACCTTTC TGTGGAGGAA ATGGTTCAGG CCATAGGCAG AACTACCCTA
TGTAAGGCCT GTTTCACAGG GGAGTATCCC CTCAAGGGGA AATATGACCT CTCCGCTCTG
GAGAGCGTTT TCGCAAGGTG A
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| Protein sequence | MNAREHCGVF GVVGPDSTKL TFEGLKLLQH RGQESAGISW IDGDRIQTRK GLGLVGEALD
PKEIGESLFS IGHVRYSTTG STTLQEAQPL DDGFIAVSFN GTITNHFQNG DFSTDTEFIL
SFLRNQLSQG RSLESSARAF MDVADGAFSL LVLSSKGEIL AMRDPRGFRP LVIGEIGDNK
VVSSEDSAIK QLGGRVIGFV HPGEIIKITR DTVVRERVSS LPTTTCAFEY IYFSRADSEI
DGISVYASRI KLGELLARNH PANGDVVVPV PDSSRPIALG FSRTSGIPLE EALVRTISSK
RSFIMPSDEK RNEVLKEKFG IVEWAVRGKR VVLVDDSIVR GNTMKRIVNS LRSAGAREVH
IRIGSPMIRF PCYMGIDFPR RSELVANIGD ERAIARELNA DSVEYLSVEE MVQAIGRTTL
CKACFTGEYP LKGKYDLSAL ESVFAR
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