Gene Msed_1976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1976 
Symbol 
ID5103363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1911033 
End bp1911371 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content47% 
IMG OID640507864 
Productmethionyl-tRNA synthetase, beta subunit 
Protein accessionYP_001192040 
Protein GI146304724 
COG category[R] General function prediction only 
COG ID[COG0073] EMAP domain 
TIGRFAM ID[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CAATAGAGGA TTTTCAAAAG GTCGAGATGA AAGTTGGGGT TGTTGTGGAG 
GCAGAAAGGA TAGAGGGGAC CAGGCTTCTA AAGCTCAAGA TAGATCTTGG AGGGGAGACA
AGACAGATAA TATCTGGAAT TGCTGAATAT TATACGCCGG AGCAAATGGT GAACAGGAGG
GTGATAGTGC TCACCAACCT GAAGCCCAGG GTGATAAGGG GATATGAAAG TCAGGGAATG
ATCCTGGCAG CAGGATGTAA AGAAGATGAG CAAAAGGGCG TGAAGCCAGT TCTTCTCGCG
CCTGATGGGG ACGTGCCCCC AGGTACTAGG ATATGTTAA
 
Protein sequence
MEITIEDFQK VEMKVGVVVE AERIEGTRLL KLKIDLGGET RQIISGIAEY YTPEQMVNRR 
VIVLTNLKPR VIRGYESQGM ILAAGCKEDE QKGVKPVLLA PDGDVPPGTR IC