Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1976 |
Symbol | |
ID | 5103363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1911033 |
End bp | 1911371 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640507864 |
Product | methionyl-tRNA synthetase, beta subunit |
Protein accession | YP_001192040 |
Protein GI | 146304724 |
COG category | [R] General function prediction only |
COG ID | [COG0073] EMAP domain |
TIGRFAM ID | [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATCA CAATAGAGGA TTTTCAAAAG GTCGAGATGA AAGTTGGGGT TGTTGTGGAG GCAGAAAGGA TAGAGGGGAC CAGGCTTCTA AAGCTCAAGA TAGATCTTGG AGGGGAGACA AGACAGATAA TATCTGGAAT TGCTGAATAT TATACGCCGG AGCAAATGGT GAACAGGAGG GTGATAGTGC TCACCAACCT GAAGCCCAGG GTGATAAGGG GATATGAAAG TCAGGGAATG ATCCTGGCAG CAGGATGTAA AGAAGATGAG CAAAAGGGCG TGAAGCCAGT TCTTCTCGCG CCTGATGGGG ACGTGCCCCC AGGTACTAGG ATATGTTAA
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Protein sequence | MEITIEDFQK VEMKVGVVVE AERIEGTRLL KLKIDLGGET RQIISGIAEY YTPEQMVNRR VIVLTNLKPR VIRGYESQGM ILAAGCKEDE QKGVKPVLLA PDGDVPPGTR IC
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