| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1957 |
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| Symbol | |
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| ID | 5103344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1898096 |
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| End bp | 1898698 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507845 |
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| Product | multiple antibiotic resistance (MarC)-related protein |
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| Protein accession | YP_001192021 |
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| Protein GI | 146304705 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2095] Multiple antibiotic transporter |
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| TIGRFAM ID | [TIGR00427] membrane protein, MarC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.55991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAATAG ATAACGTCCT CGTGATTGCA ATCAAAGTTT TTGCGGTGAT GGATCCTTTC
TCGATTATAC CCTACATCCT CTCGATCTTT GAGGAGGCCA CTCAGGGCGG AGAAAACATG
AAGTGGTCCT ACCTTGTCAA CAAGGTGGAA GTTGCGGTTG TGGTATTACT TTTGCTCTTT
TCCGTTATAG GTAGATTCAT TCTAGAATTC TTGGGAATAC AACCCTACTC CCTGGAGATA
GGAGGAGGTA TTCTACTCGT ATACCTGGGA ATAGATACTC TTGGTGGATT CCAACAACTC
AAGTTCCTGT CCAAGAGATT GGAGGAAGCA GTCGTTACGC CCATTGCCAC GCCCCTAATC
GTAGGTCCAG GTACCATGAC TGCATTAGTC TCGCTATCTG TGCAGAACAG CATCATTGAA
CTGGCCATAG GGAGTTTGAT AGCTGCGCTT CTAACGTACC TAGTGCTCAT GATAGGACCG
CTTCTCATAA AGATCCTTGG AAGGACTGGA ACCGTGGCCG CTGGTAGGTT TACTGCTATC
ATCATAGCTG CCTTTGGAGT ACAGTTAATT ATACAGGGTA TATCACAGGC AAAGGTTGCA
TGA
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| Protein sequence | MIIDNVLVIA IKVFAVMDPF SIIPYILSIF EEATQGGENM KWSYLVNKVE VAVVVLLLLF
SVIGRFILEF LGIQPYSLEI GGGILLVYLG IDTLGGFQQL KFLSKRLEEA VVTPIATPLI
VGPGTMTALV SLSVQNSIIE LAIGSLIAAL LTYLVLMIGP LLIKILGRTG TVAAGRFTAI
IIAAFGVQLI IQGISQAKVA
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