Gene Msed_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1901 
Symbol 
ID5103288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1843783 
End bp1844073 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content45% 
IMG OID640507788 
ProductNADH-ubiquinone oxidoreductase, chain 4L 
Protein accessionYP_001191965 
Protein GI146304649 
COG category[C] Energy production and conversion 
COG ID[COG0713] NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00687805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0793607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCA TTGTTGTGGA TACGGCTCTA GTTGTGGCTA GTCTTCTGGT GGCAATCGGG 
ATATACGGAC TTCTGAACAG CAAGAACGTG ATAAGGGTTC TTCTGTCCTC CGAGATCATC
CTTAACGCCT CAATTCTTCT AATCTTTTCC ATGTCTTCCC TAGCTGGGAA GTCATATACA
CCTCTCATTT TTTCCGTGTT TGCCATAGGT ATGGCCCTCA CAGAGGTCGT GGTAGCTTTC
GCTTCCATTA TCCTGTATTA TAGGCAAAAG GGTTCGTTGG AGGTGGATTA A
 
Protein sequence
MNPIVVDTAL VVASLLVAIG IYGLLNSKNV IRVLLSSEII LNASILLIFS MSSLAGKSYT 
PLIFSVFAIG MALTEVVVAF ASIILYYRQK GSLEVD