| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1898 |
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| Symbol | |
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| ID | 5103285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1841745 |
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| End bp | 1842803 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507785 |
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| Product | NADH dehydrogenase subunit H |
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| Protein accession | YP_001191962 |
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| Protein GI | 146304646 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0180885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.286914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC TATTCGATAT CAGATATTAT ATTCTCTACC CATCATTTTT CGCTCCAATA
ATTCTTCCAG GGTTAATTTT CACTGCTATA CTCCTCCTTA CAACTATCTG GTTTGAGAGA
AAGGCTGCTG CGAGGGTTCA AATGAGGATT GGTCCCTATT ACGCTTCCAA GAGACTGGGA
GGGTACCTTC AGTTGGTCGC TGATGCTCTG AAATTCGTGT TCTCAGAGGT TATAGTGCCC
GAGGGAGTTA ACCCAACCCT GTTCGCGCTG ACGCCAGTGC TCGTTGTGGC CATGTCCTTT
CTCCCCCTTG CAGTGATACC AGTGTCAGTG ATCCCACCTT CTGGTTCAAT CTTCTCGATC
TATTTCCACG ACTTCTACGA TCCCAACGTG GGGTTAGGAG TTTTGGTGGG TCTATTTACC
CAGTATAACA TGCTATTAAT CCTGGCAATA GAGTCCATTT ATCCAGCGAT GATCATCCTA
ATGGCCTGGA GTACCAACAA TAGGTTTGCC ATAGTTGGGG CAGTCAGAGA ATCCTACCTT
TCCGTGTCCT ATGACGTGCT TTTGCTCATG TCCACCATAT CCATGGCCCT GGAGTATCAT
ACGCTGGATC TAGTGAAGAT AGTTCAGACG GGGGTACCCG GAATTCTTGC CAATCCTCTT
GCAGCAGTGA CCTTCTTCAT TGCAATGATA ATCGGTAGTG CGAGGTTCCC CTTTGATATA
GCTGAGGCCG ATACTGAGCT CGTTCTTGGA CCAGCGACGG AGTACAGCGG TCTCCTCTTT
GTGTTAACCA TGGCAGGCTC CTACGTGGGG AACTTTGTGT ACGCCCTGGT GTTTACTGAC
ATGTTCCTAT GGGGCTGGTA CCCGCTTTCA GGATTCCCAG GAGCCCTTCT CACGGTTATT
AAGGCTTCAA TTCTCGTGTT TTTCTCGGTG TTCCTCAGGT CAGTCTACGG GAGGTATAGA
TTGGATCAGG CCCTTAGGGG AAGCTGGAAA TATATATTCC CCTTGGCCAT AGCCTCCCTA
TTTCTAGGTT TAGTGGTGGG TTACCTATGG ATTCAGTAA
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| Protein sequence | MNILFDIRYY ILYPSFFAPI ILPGLIFTAI LLLTTIWFER KAAARVQMRI GPYYASKRLG
GYLQLVADAL KFVFSEVIVP EGVNPTLFAL TPVLVVAMSF LPLAVIPVSV IPPSGSIFSI
YFHDFYDPNV GLGVLVGLFT QYNMLLILAI ESIYPAMIIL MAWSTNNRFA IVGAVRESYL
SVSYDVLLLM STISMALEYH TLDLVKIVQT GVPGILANPL AAVTFFIAMI IGSARFPFDI
AEADTELVLG PATEYSGLLF VLTMAGSYVG NFVYALVFTD MFLWGWYPLS GFPGALLTVI
KASILVFFSV FLRSVYGRYR LDQALRGSWK YIFPLAIASL FLGLVVGYLW IQ
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