| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1871 |
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| Symbol | |
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| ID | 5104139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1814238 |
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| End bp | 1815413 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640507757 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001191935 |
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| Protein GI | 146304619 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.481027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCGTGG AAATTGAGCC ATCAAGGATC AAGGGAAGGG TTAAGGCTCC GCCCTCAAAG
AGCCTTGGAA TCAGGTACGT TTTCCTGTCC CTTCTGACGG AGGTTTCGCT CGAGAACCTC
CCAGAGTCGG ATGACGTAAG GGTTGCAATT AACGCGGTCA AGTCCCTGAA GGAGGGGAAG
GATGAGCTCT ACCTGGGTGG ATCTGCCACC ACCCTAAGGA TGATAATACC AGTGATCCTA
GCCATGGGGC GAAGGGTGAA ACTTGACGGA GACGACACCC TGAGGAGGAG ACCTCTGAAC
GCGTTGAGAT GGCTTCCAGG CAAGTTCTCG TCAAATTCCC TTCCCATGAC AGTTGAGGGA
AGCCTGGGAC CAGAGACGCA GATTGAGGGG TGGGAAAGTA GTCAGTACAT CTCTGGGTTA
ATCTACGCCT ACTGCCTGAG GGGGGAGGGA AGGATCAGGG TAATTCCCCC AATCTCGTCA
AGGGGCTACA TCTTCATGAC CGCTGACGTC ATCTCCTCAA TAGGGGGAAA GGTGACGATT
CAGGGGGAGG AGATAACCGT GGAGTGCAGA AACCTTCGCA AGTTTGGGGG ATCTGTTCCA
GGCGATTACG CCCTGGCTTC ATTTTACGCA GTGGGGGCAG TACTAACGGG TGGGGAAGTG
GAGATCACCA ACCTTTACGC TCCCCCAAGT TACGTTGGGG ACCACGACGT GGTTAGGATG
GTGAAGGAGG CGGGAGCTGA GAGCTACGTG AGCGAGAACA GGTGGATAGT GAGGGACACC
GGGGTCAGGG TCCCCATATC CGTGTCAATC AACGACGTGC CAGACCTGGC GCCCTCCCTG
GCAGCCCTCA TGGCCGTGAT ACCGGGTGAG TCCAGGATAA TGGATAGCGA AAGGCTGAGG
ATCAAGGAGA GTGACAGGAT ATCCACTATC CTGAACACGT TAGCCAGCTT TGGGATATCA
GGATCTTACT CAGCCGGCAC TATCACAGTG AAGGGAGGAG AGCCGAGAAG AGGGGAGGTG
GAGTGCCCCA AGGATCACAG GATAGCCATG ATGGCTGGCG ATCTGGCCTT GAGGGTAGGT
GGTAAAATCA CGAGTGCAGA GTGCGTGAAC AAGAGCAACC CTGGATACTG GAGCGATCTC
TCGGCTCTGG GAGGGAAGAT AAGGATTCAT GAGTGA
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| Protein sequence | MFVEIEPSRI KGRVKAPPSK SLGIRYVFLS LLTEVSLENL PESDDVRVAI NAVKSLKEGK
DELYLGGSAT TLRMIIPVIL AMGRRVKLDG DDTLRRRPLN ALRWLPGKFS SNSLPMTVEG
SLGPETQIEG WESSQYISGL IYAYCLRGEG RIRVIPPISS RGYIFMTADV ISSIGGKVTI
QGEEITVECR NLRKFGGSVP GDYALASFYA VGAVLTGGEV EITNLYAPPS YVGDHDVVRM
VKEAGAESYV SENRWIVRDT GVRVPISVSI NDVPDLAPSL AALMAVIPGE SRIMDSERLR
IKESDRISTI LNTLASFGIS GSYSAGTITV KGGEPRRGEV ECPKDHRIAM MAGDLALRVG
GKITSAECVN KSNPGYWSDL SALGGKIRIH E
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