| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1867 |
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| Symbol | |
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| ID | 5104135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1811079 |
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| End bp | 1812704 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507753 |
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| Product | DEAD_2 domain-containing protein |
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| Protein accession | YP_001191931 |
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| Protein GI | 146304615 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.512598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCTAA GGGACTGGCA ATTAGCGCTC AAGGACAAGG TAGTGAAGGG GCTAAGGGAA
GGCAATCTAG TAGCCCTGCA GTCCCCCACT GGAAGTGGAA AGACTCTTTT CTCTCTCGTT
TCCGCGTTTG AAGTTAGGCC TAGGGTTCTT TTCACTGTTA GAACCCACAA CGAGTTCTAC
CCTGTTTACA GGGAAGTTAA CAGGCTCGGG AAGAGGTTCT CCTTCGTCAT GGGGAAGGGA
AGGGCCTGCC TCTACGCCGA TGAAGGCGCA GATCCTGAGG ACATAAAGTG CTCCCTGTGT
GACTCCTACG TTGCGATGTT CGTGGATTCC ACGGAGCCTC CCTTTACCCT TCTCAAGGAA
CTCAAGGAGA GAGGGAGAAG GGAGAAGTTT TGCCCCTATT TCTCCCTGAT TAACTCAACC
AGCGTCGCCG ACGTGATTGC CGTGACCTAT CCCTACGTGT TCACGCCTTG GATGTGGGAG
GCCCTTGGTC TGGAACTAGA CGACTTCGTC CTCGTGGTGG ATGAGGCCCA CAACCTGGAT
AACTTGAACG AGCTAGCAGA GAGGAAGCTC AGCCAGCAAA TCCTCGACCT CGCCCTCAAG
GAGGTTAAGA GCAAGGAGGC AATCTCGATC CTTGAGAGAA TCAAGAGGGA ACTAGGTGAG
GTGGTCCTCC AAGAGGAGAG ATACATCAAG GTAGAGGATT ATCCTAAGGT GGACGGACAC
GAACTCAAGC TCCTGAAGGA GGAATACGAG GACAGAAGGA ACGAGATGAT TGCCAACAGA
TCCATAAGGA AACTCCACTT GGGATCGGTG ATCAAGTTCT ACAGCTCAGA TGAGGCCCCA
GTCTTCTCCT ACCGTGGTCA CCTGGTGATG AAGCCCCTCC TCTCCTCACC ATTTCTGTCG
ATCCTAAATC GCGACGACCT ACCCGTGATA CTAATGTCAG GGACCATGCC ACCAAAGGAG
TACCTGAGCA AGGTCCTGGG AATACAGAGG CAGATTCTTT ACCTAGACGT CGAGAAGGAG
GTGAAGGCGA AGGTCACAGG GTCCTTTGAT TGTATGCTTG CAATTGACGT AACCTCGTCC
TACTCCCTGA GGAGCCAGGA GATGTGGAAG AAATACGCCA GCTACCTCCT CAGGATATAT
CACCTGGCCA AGGCCAACAT CCTCGCGATT TTCCCCAGTT ACTCCATCAT GGAGAAGGTC
ATGGCCCACG TAAAGGTTGA CAAGTACGTC GAAGGTAGCA GGACAAACCT AGAGGAGGTG
ATCGGTGAGT CCGGAAAGAG GAAGCTCATC ATTGCTGGAG TTGCCCGGGG TAAGCTCTCC
GAGGGGATTG AGCTAACCAG GGACGGAGCC AGCGTCATAA GCGACGTCGT CCTCTGCGGT
ATACCCTATC CCTCCTTTGA CGATTACCTG AAACTTAGGA GCGAGGCCAT ATACAAGTTA
ACGGGACAAC CTGTTAGGGA GGCTCTCATG GAGATACCGG CACTCATAGC GGTGAAGCAG
GCAATAGGGA GGGCAATCAG GAGCAGGCAG GACCATGCTA CCGTCTGGTT ACTAGATAGG
AGGTTTGAAA CCTCGTGGTG GAAACTAAAG ATAAACTGTT TTAATCCCAA GAAGGTGAAA
CTCTAG
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| Protein sequence | MELRDWQLAL KDKVVKGLRE GNLVALQSPT GSGKTLFSLV SAFEVRPRVL FTVRTHNEFY
PVYREVNRLG KRFSFVMGKG RACLYADEGA DPEDIKCSLC DSYVAMFVDS TEPPFTLLKE
LKERGRREKF CPYFSLINST SVADVIAVTY PYVFTPWMWE ALGLELDDFV LVVDEAHNLD
NLNELAERKL SQQILDLALK EVKSKEAISI LERIKRELGE VVLQEERYIK VEDYPKVDGH
ELKLLKEEYE DRRNEMIANR SIRKLHLGSV IKFYSSDEAP VFSYRGHLVM KPLLSSPFLS
ILNRDDLPVI LMSGTMPPKE YLSKVLGIQR QILYLDVEKE VKAKVTGSFD CMLAIDVTSS
YSLRSQEMWK KYASYLLRIY HLAKANILAI FPSYSIMEKV MAHVKVDKYV EGSRTNLEEV
IGESGKRKLI IAGVARGKLS EGIELTRDGA SVISDVVLCG IPYPSFDDYL KLRSEAIYKL
TGQPVREALM EIPALIAVKQ AIGRAIRSRQ DHATVWLLDR RFETSWWKLK INCFNPKKVK
L
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