| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1864 |
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| Symbol | |
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| ID | 5104132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1808730 |
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| End bp | 1809728 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507750 |
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| Product | diphthamide biosynthesis protein |
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| Protein accession | YP_001191928 |
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| Protein GI | 146304612 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1736] Diphthamide synthase subunit DPH2 |
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| TIGRFAM ID | [TIGR00322] diphthamide biosynthesis protein 2-related domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.866923 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTTACA TTTTTGATGA AGACCTTCTC AAGTCCGAGA TCAGGAAGAG AGGGGCTAGG
AGGGTTCTCC TTCAGTTCCC CGAGGGTTTA AGGTATTTCT CCACGGAGTT GGTGGAGAGG
TTAAGGGAAT CCCTTCCAGA CGTTGAGTTC GTGATATCGG GAGAACCGAG CTGGGGGGCC
TGTGACATAG CTGAAGACGA AGCCTCCCTT CTCAAGGTCG ACCTCCTCAT CCATTTCGGC
CACTCTCCTT ATACCTGGTA TTACCCCAGG TTTCCAACCC TCTTCGTTAA GGCTGAGAGC
ACGGCTCAAG TGGAGAGGGA GACCCTGGAC AAGCTAGTTG ATGTCCTTCG CGAGAGAGGA
GCTAACTCGG TCGCCCTAAC CTCGACCGTT CAGCACGGGA AACTACTGAA CCAGGTGAAG
GAGCACCTTT CCCCCCACTT CCACGTGGAG GTTGGAAGGC CTTCCTCACC TTTCATGGGG
GATGGACAGG TCCTGGGATG TGACTACAAG TCTGCCCAGG TTGAGGCCGA CGTGCACGTA
AACATCTCAG GTGGGGTTTT CCACGCCCTC GGACTGGGAC TGGCCACGGG TAAACCGGTC
ATCAAGCTTG ACCCCTACAC GAGATCTGTG GAGGACCTAA CTCCTCAGGT TTTCAAGGTC
CTCAAGGTGA GATATTCCAA GATCATGGAG GCCATGGACG CGAGGACCTG GGTCATTGTG
CAGGGATTGA AGGTTGGCCA GAACAGGCCC CTCATGGTTA AGTCCCTAGA GTCCAGGCTC
AAGTCCCTGG GGAAGACAAC CTACGTGGTC ACAAGCAAGG TTCTGAACCA GGACTCCCTC
AGAAACCTAG ATAGGAGCTA CATCGACGCC TTCGTGGTCA CATCGTGTCC AAGATTACCC
ACGGATGACC TCTACCTTTA CGAGAAGCCC GTGTTGACAC CTGGAGAGGC GAAAATGATT
ATAACCAATA AACTAGAACC ATACATATTT CCGTGGTAA
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| Protein sequence | MSYIFDEDLL KSEIRKRGAR RVLLQFPEGL RYFSTELVER LRESLPDVEF VISGEPSWGA
CDIAEDEASL LKVDLLIHFG HSPYTWYYPR FPTLFVKAES TAQVERETLD KLVDVLRERG
ANSVALTSTV QHGKLLNQVK EHLSPHFHVE VGRPSSPFMG DGQVLGCDYK SAQVEADVHV
NISGGVFHAL GLGLATGKPV IKLDPYTRSV EDLTPQVFKV LKVRYSKIME AMDARTWVIV
QGLKVGQNRP LMVKSLESRL KSLGKTTYVV TSKVLNQDSL RNLDRSYIDA FVVTSCPRLP
TDDLYLYEKP VLTPGEAKMI ITNKLEPYIF PW
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