| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1851 |
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| Symbol | |
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| ID | 5104119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1798020 |
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| End bp | 1798550 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640507736 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001191915 |
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| Protein GI | 146304599 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.213204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAGT TCACCCCCAT CCTTGGACCT GTTACCCTAA TCGAGACAAC CCAATACCCT
GACGACCGCG GGTTCTTTCA GGAGCTTTTC AGGGAGTCGC AATTCCCCTG CAGGTTCGTT
CAGGTGAATC ATTCCTTCTC GAGGCGAGGG GTTCTTCGCG GGCTTCACTT TCAGGCCATG
CCGGTCCCAC AGGGGAAGCT GGTCACGGTG ATCACGGGAA GGATTTACGA CGTCGCAGTT
GACCTCAGAC GCGGTTTCAA GGGATGGGCT GGCGTCGAGT TAACCCCTGG GAAGCTACTC
TGGATACCGC CTGGATTCGC CCACGGGTTT CAGGCGCTTG AGGACTCACA TGTGATCTAC
TTCGTGACGA GGGAGTTCTC GCCACAGCAC GACGCGGGGG TTGCGTGGGA TGACCCTGAG
ATAGGCGTGA GGTGGCCCCT TCCTAACCCC ATCCTGTCGG AGAAGGACAG GAAGCTACCG
AGGTTGGCTG AGTCGAGGGC TAACTTTCCC GAAGATCCTG GGACCTGTTG A
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| Protein sequence | MFKFTPILGP VTLIETTQYP DDRGFFQELF RESQFPCRFV QVNHSFSRRG VLRGLHFQAM
PVPQGKLVTV ITGRIYDVAV DLRRGFKGWA GVELTPGKLL WIPPGFAHGF QALEDSHVIY
FVTREFSPQH DAGVAWDDPE IGVRWPLPNP ILSEKDRKLP RLAESRANFP EDPGTC
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