| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1818 |
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| Symbol | |
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| ID | 5105381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1765104 |
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| End bp | 1765715 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507717 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001191896 |
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| Protein GI | 146304580 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.871234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TTTACAGGGT CAAGTTTTCA CTAATACATG AGGGGTGTTG GACAAGCAAG
ATAAGAGATG ACAGGGTCGT CACGTTAAGG CTTTCACAGT ACAACAGAAG GAAGGTCCAC
GTTCTCGTGG CTTCATCGAA ATTGATTGTT CGCGATCTAA AGACCTCAGA TAACGTGGAC
GACATCCTAA AATACAGGAA AATGAAGGGA GGATACGTCA TCGAATTCCT TGAGGATTTA
GATACCACCA TATCAGGGGC TATTCTAGAG TCCGGAAGTA ACGTGTTGGA GTATAGCAAC
ACTGTTAAGG CCGGTATGGA AAAGTGGGAG GTAATAACAA CAAGTAAAGC CCTCGTAAAC
CAATTCGCTG AAAGGTTCAA GGTTAACGAC CTCACGGTTC ACGAAATGAA GTTTCCCGAG
CTGTTTGGCT CTGGGTTAAC GGAAAAGGAG ATGCTCACCC TGAAAACTGC CCTATCCATG
GGCTACTTTA ACTATCCTAG ATCTGTTAAG GCCAAGGACA TAGCTGAAAG CCTAGGTGTC
TCTAAACAAG ATTTCCTATA CCATCTGAGG AATTCCATTA ACAAGATCGT GTCGTCCTAC
GACCTCGGTT AG
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| Protein sequence | MKKLYRVKFS LIHEGCWTSK IRDDRVVTLR LSQYNRRKVH VLVASSKLIV RDLKTSDNVD
DILKYRKMKG GYVIEFLEDL DTTISGAILE SGSNVLEYSN TVKAGMEKWE VITTSKALVN
QFAERFKVND LTVHEMKFPE LFGSGLTEKE MLTLKTALSM GYFNYPRSVK AKDIAESLGV
SKQDFLYHLR NSINKIVSSY DLG
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