| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1778 |
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| Symbol | |
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| ID | 5104778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1721394 |
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| End bp | 1722125 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507676 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001191857 |
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| Protein GI | 146304541 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.809428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGCTT TAGTTACTGG GGCATCAAAG GGGATAGGGA AGGCCACGGT ACAACTTCTC
ATGAGGGAAG GATACAAGGT CGTGGCCACA TCTAGGACCG AGCCAGAGGT TGGCGACTAC
AGGTTCAGGC TAGACGTATC CAATAGGGCT GAGGTCGAGT CCCTGATCGC GAAGGTGAGG
AACGAGATTG GGGAAATAGA CGCTGTGGTG AACAACGCTG GCTTTGGGGT GTATGGCTCC
TTCCTGGAAA CCTCGTTGGA GGAAGAGGAA TACATGGTTA AAACCAATTT CCTAGGCCCG
ATCTACGTCA CGAAAAGTAT CTATCCTGTG ATGGTCAAGA GGAGATCGGG CTCCATAGTT
AATGTGGTGT CTGAGGCAGC TTACGTTAAC TCTCCGGTTC TCCTGGTGTA TTCCGCAACC
AAGGCTGGAC TAGCTAGCTT CACCAACGGA CTTTGGGCTG AAGCCAGAAA GTACGGAGTT
AAGGTATCTG GAGTTTACCC TGGTCCCGTC AAGACCAACT TCTCCTCTCA CCCGTCCTTT
AAGGGGAGGG AAATAACACC AAAGTACGCT GTGGAACCAG AAAAGGTGGC CAAGGCAATT
TTAAAGGGAA TAAGAACGGG GAAGAGGGAG ATCTACGTTC CCTCTAAACT CAAGCTAGAT
CCCTATTTCC TTAAGCTAGC TAACGTAATG CAAGAGTTAA CCTATAGGCT CGTGGACAAG
TTTTCTGTTT AG
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| Protein sequence | MLALVTGASK GIGKATVQLL MREGYKVVAT SRTEPEVGDY RFRLDVSNRA EVESLIAKVR
NEIGEIDAVV NNAGFGVYGS FLETSLEEEE YMVKTNFLGP IYVTKSIYPV MVKRRSGSIV
NVVSEAAYVN SPVLLVYSAT KAGLASFTNG LWAEARKYGV KVSGVYPGPV KTNFSSHPSF
KGREITPKYA VEPEKVAKAI LKGIRTGKRE IYVPSKLKLD PYFLKLANVM QELTYRLVDK
FSV
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