| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1775 |
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| Symbol | |
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| ID | 5104775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1717749 |
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| End bp | 1718693 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507673 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_001191854 |
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| Protein GI | 146304538 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2514] Predicted ring-cleavage extradiol dioxygenase |
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| TIGRFAM ID | [TIGR02295] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0882804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACA TATTACGCGT CTCCCATGTA GTTTACAGGG TCACTGATCT GGACAGGGCC
CTCTTTTTCT ATAGGGACCT CCTGGGCTTC GTGGAGACGG AGAGAAATGG AAACGAGGCT
TATTTACGCG GAGTTGAGGA GGGACAACAT CACAGTCTTG TTTTAAGGAA AGCTGACTCC
CCCGGTTTAT CCTACGCCTC CTTGAGGGTG AGAAAACCCG AGGTTCTGGA TCAGGCCAGG
GAGAAGTTCG ATGAGATTGG CATAAGGTAC AGGAGAATGA AGGAAAGGGG AGTGGAGGAG
GCAATCCTCT TTGAGGACCC GCAGGGTCTA CCTATTCTCC TGTATCACGA CATGGAGTAC
GTGGGAGATA GAAGGCTCAA GTTCCACGAG TACAGGGGAG TGACCCCCGT AAGGATAGAT
CACATCAATT TCATGGTAAG GGACCTAGAC GTTGAGGTTG AGTTCTACAC CAAGGTCTTT
GGATTCACTG AGACCGAGAC GTTCCTGGAT AGGGATGGGA AAAAGATGGT CTCCTGGATG
ACCAAGATCG GTCACTCGCA CGAGATTGCC ATCGCCAGAA GTTCCAGGAA CGTTCCGGGG
TTTCATCACG CAACCTTCTA CGTTCATGAC GTGAGGGATA TCATAAGGGC TGCGGACCTA
GTCTCCTCGG CTCAACTTTG GGACAGCCTA GAGAGGGGAC CTGGAAGGCA CGGGGTTACC
CAGGGGTTTT ACGTTTACCT CAGGGATCAG GACAGGAATA GGATAGAGTT CTTCACGGGC
GATTACTTCG TTCTAGATCC CGATAAGTGG AAACCCATAG CCTGGACCTG GGACCAGCTG
AGGTACAGGT CAGACTTCTG GGGAAGGGAG GTGCCAGAGA CCTGGCTCAA GGAGTGGGTT
CCCGTGGAGG ATATCACGGG TAAATTACGG GGGTGGAATA ATTGA
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| Protein sequence | MLDILRVSHV VYRVTDLDRA LFFYRDLLGF VETERNGNEA YLRGVEEGQH HSLVLRKADS
PGLSYASLRV RKPEVLDQAR EKFDEIGIRY RRMKERGVEE AILFEDPQGL PILLYHDMEY
VGDRRLKFHE YRGVTPVRID HINFMVRDLD VEVEFYTKVF GFTETETFLD RDGKKMVSWM
TKIGHSHEIA IARSSRNVPG FHHATFYVHD VRDIIRAADL VSSAQLWDSL ERGPGRHGVT
QGFYVYLRDQ DRNRIEFFTG DYFVLDPDKW KPIAWTWDQL RYRSDFWGRE VPETWLKEWV
PVEDITGKLR GWNN
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