| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1765 |
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| Symbol | |
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| ID | 5104765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1700007 |
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| End bp | 1701389 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640507660 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_001191844 |
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| Protein GI | 146304528 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02146] homocitrate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.877684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAG GTATACTAGA TTCGACTTTG AGGGAAGGCG AACAGACTCC TGGAGTTGTG
TTCACCACTG AGCAGAGAGT CGAGATAGCC AAGGCCCTAT CCGATCTGGG AGTTTCCATG
ATTGAGGCCG GTCACCCGGC AGTTTCACCG GACATTTATG AGGGAATAAA GAGGATCGTG
AAGCTCAAGA GGGAGGGAGA GATCACCTCC GAGATCCTGG GTCACAGCAG GGCTGTGAAG
AGGGACGTGG AGATTGCCAG CGAACTCGAG GTGGACAGGA TAGCCATCTT CTACGGGGTA
AGCGACATTC ACCTCAAGGC CAAGACTAAG ACCACCAGGG AGGAGGCTCT CAACATCATT
GCGGACGTGG TTCAGTACGC CAAGGCCCAC GGGGTCAAGG TCAGGTTCAC GGCAGAGGAC
GCAACCAGGA CTGACCTGGA CTACCTGGTT AAGGTCGCCA GAACGGCTAG GGATGCAGGA
GCTGACAGGA TAAGCATAGC TGATACCGTG GGGATCCTCT ACCCCGTGAA GACCAGGGAA
CTCTTCTCCT ATCTAGTAAA GGAAGTCCCC GGGGTCGAGT TCGACATCCA CGCCCACAAC
GACCTGGGTA TGGCAGTGGC CAACGCCCTG GCAGCAGTTG AGGGAGGCGC AACCATAATT
CACGCTACCG TGAACGGCCT CGGTGAGAGA GTGGGAATTG TTCCCCTGCA GGCCGTGGCA
GCAGCCCTCA AGTACCACTT TAACGTCGAC GTGGTTAAGC TTGACAGGCT CTCGAGTGTG
GCCTCGCTCG TGGAAAAGTA TAGCGGGATC ACCATGCCCC CCAACTTCCC AATCACGGGA
GATTATGCCT TCGTGCATAA GGCTGGAGTC CACGTGGCTG GGATACTCAA CGACCCAAGA
ACTTACGAGT TCATGCCACC CGAGGTCTTT GGTAGATCCA GGGATTACGT CATAGACAAG
TACACCGGTA AGCACGCGGT CAAGGATAGA TTTGAAAGAC TTGGGGTAAA GCTGGACGAC
AGGGAACTGG AGCAGGTACT TGCGAGGATC AAGTCCAGTG AGGGAACCAG GTACTTCAGG
GATGTGGACC TCCTGGAGAT AGCGGAGGAG GTCACGGGTA AGGTGCTCAA GCCGAGACCT
CCAGAGAGGA TTGAGGCCGT GGTCTCGGTG AAGTGTGGCT CCAACGTTTA CACCACCTCC
GTGACCAGGA GGCTGTCCAT AATCCCCGGG GTAAAGGAAG TCATGGAAAT TTCAGGGGAT
TACGACATAC TCGTTAAGGT GGAGGCAAGG GACTCAGCGG AGCTTAACAA CATTGTGGAG
AGCATCAGGT CAGTGAAGGG AGTCGAGTCA ACCCTGACCT CACTGGTTCT CAAGAAGATG
TAA
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| Protein sequence | MKVGILDSTL REGEQTPGVV FTTEQRVEIA KALSDLGVSM IEAGHPAVSP DIYEGIKRIV
KLKREGEITS EILGHSRAVK RDVEIASELE VDRIAIFYGV SDIHLKAKTK TTREEALNII
ADVVQYAKAH GVKVRFTAED ATRTDLDYLV KVARTARDAG ADRISIADTV GILYPVKTRE
LFSYLVKEVP GVEFDIHAHN DLGMAVANAL AAVEGGATII HATVNGLGER VGIVPLQAVA
AALKYHFNVD VVKLDRLSSV ASLVEKYSGI TMPPNFPITG DYAFVHKAGV HVAGILNDPR
TYEFMPPEVF GRSRDYVIDK YTGKHAVKDR FERLGVKLDD RELEQVLARI KSSEGTRYFR
DVDLLEIAEE VTGKVLKPRP PERIEAVVSV KCGSNVYTTS VTRRLSIIPG VKEVMEISGD
YDILVKVEAR DSAELNNIVE SIRSVKGVES TLTSLVLKKM
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