| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1761 |
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| Symbol | |
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| ID | 5104761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1697872 |
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| End bp | 1698669 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640507656 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001191840 |
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| Protein GI | 146304524 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.254427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCTG TTCAGGGAAA AAGGGTACTT GTTACCTCAT CCACAGAGGG AATAGGCAGG
GGAGTTGCAG AGACCTTTGC CTCCCACGGC GCCGTGGTCA CAATCACCTC TAGATCTGGG
GAGAAGTTGC ACCGGGCACT TCACGACCTA AGGAAGATCA GCCCAGCAGT TTACGGAACC
CAGTCAGACA TGACCAATCT GGGCTCGTTG AACTCCCTAG TCTCATACGC TCTCCACGTT
ATGGGAGGAA TAGACATCCT AGTGGTGAAT TCAGGGAATC CACCCAGGGA ACCCATCACC
TTCTCAGAGG CTGACATTCA CGACTGGGAA TATGCGACCA AGCTCTACCT TCTCAGCGCC
GTCTCCCTTT CCAAGCTGGT TATCCCCGAC ATGATTTCCA GGCAATGGGG CAGGATATTC
TTCCTCTCCT CCTGGACCGT GAGGGAGCCC CAGAGCATCC TAGTCCTCGC TGACGTTTCC
CGTTCCCCAC TTCTTCAGTT AACCAAGATC CTCTCAAGGG ACTACGGCAG ACACGGGATC
ACCGTCAACA CGATCCTCAT GGGTAGCTTC CCCACCGAAG GCGCCAAGAA AACCCTATCG
CGATACGCTG AATCCAAGGG CCTCCCCTTC GAACAAGTTT GGAAGGAGAG GGTCCTCGAC
CCCATCTCCG TTGGTAGGCT GGGCGATGTG AAGAGGGACC TAGGCTCCCT CCTTCTCTTT
CTCTCCACGG ACATGGGAAG TTACATCACG GGCACAAGCA TCCTGGTGGA CGGAGGAACA
ACGTCATCCG TGGGTTAA
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| Protein sequence | MFPVQGKRVL VTSSTEGIGR GVAETFASHG AVVTITSRSG EKLHRALHDL RKISPAVYGT
QSDMTNLGSL NSLVSYALHV MGGIDILVVN SGNPPREPIT FSEADIHDWE YATKLYLLSA
VSLSKLVIPD MISRQWGRIF FLSSWTVREP QSILVLADVS RSPLLQLTKI LSRDYGRHGI
TVNTILMGSF PTEGAKKTLS RYAESKGLPF EQVWKERVLD PISVGRLGDV KRDLGSLLLF
LSTDMGSYIT GTSILVDGGT TSSVG
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