| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1688 |
|---|
| Symbol | |
|---|
| ID | 5105334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1626925 |
|---|
| End bp | 1627509 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640507582 |
|---|
| Product | phosphoribosylanthranilate isomerase |
|---|
| Protein accession | YP_001191767 |
|---|
| Protein GI | 146304451 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0135] Phosphoribosylanthranilate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0383665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0673555 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGG TGAAGATTTG CGGAATAGCT ACACTGGATG ATGCTGTGGA CATATCTAGG
CTAGGAGTTG ATATGCTAGG TTTCCTTGAG GACCCAGTGA GCCCTAGGTA CGTTAAGCCC
GATTTCTTGA GGATTGTGAG AGATAATGTT TCTGCCCCCC TTGTTTCGGT GAATGTTTTA
CGTCCGCTTC TCGTTGCCCT TAAGAACCCA TTCGCCGATA TAGTTCAGAT ACATAGCGTC
TTGAAGGAGG AAGAACTGGA ACTACTTAGA TCGTACTCTA GGAAGTTCAT TCTCTATGTA
CCTTCGTCGG AGAGATACTT GGATTACCTA AGGAGGGTCC TAGACATCAC CAACATGGTT
CTGCTAGACT TGGAGAGGAA GGGAGATAAA CCTAACTTTG GTTTCTTGAC AAAGGTTCTA
AGGGACTACC CAGGACTAGG CGTTGGAGGA GGTATCTCCC CTGATAACGT TCACGATTTC
CTGAAACTTG AGCCTGGTTG GTTGGACGTA TCCCGGGGAG TTGAGGACTA TCCGGGGAAG
AAGAATCTGG GTAAGGTAAG AAAGATTTTG GAGGCGATTA GATGA
|
|---|
| Protein sequence | MTKVKICGIA TLDDAVDISR LGVDMLGFLE DPVSPRYVKP DFLRIVRDNV SAPLVSVNVL
RPLLVALKNP FADIVQIHSV LKEEELELLR SYSRKFILYV PSSERYLDYL RRVLDITNMV
LLDLERKGDK PNFGFLTKVL RDYPGLGVGG GISPDNVHDF LKLEPGWLDV SRGVEDYPGK
KNLGKVRKIL EAIR
|
|---|
| |