Gene Msed_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1686 
Symbol 
ID5105332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1625085 
End bp1625666 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID640507580 
Productanthranilate synthase component II 
Protein accessionYP_001191765 
Protein GI146304449 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0444657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0647368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATAA CCCTGATAAT AGACAATTAC GACAGTTTCG TTTACAACAT TGCGCAGAGC 
ATAGGCGAAC TTGGAAGCTA TCCCCTAGTG GTTAGAAACG ACGAGATATC TGTGAAAGGC
GTGGAGAGAT TAAGGCCTGA TAGAATAGTG ATATCGCCAG GGCCAGGATC CCCAGAGAAA
GCTGAAGATG TAGGGATAGT TCCTGAGGTT ATAAGGATCC TGGGAAAGAG AATCCCAATC
CTGGGTGTCT GCTTAGGGCA TCAGGCCATA GGCTATACGT TCGGTGCTAG GATCAGGAGG
GCAAGGGTAA TATATCACGG GAAACTGAGT ACAGTGATTA GGACTGGCGA TAGTCCCCTA
TACACCGGCT TACCGACAGA GTTCAAGGCA ACCAGGTATC ACAGCCTAGT TGTGGACAAT
GTGAGCTCTC CTCTTATGGT GGACTCCGTT TCCAAGGAGG ACGGAGAGAT AATGGGTCTA
CATCACGCAG AGTACAGGAT TTACGGGGTT CAGTTTCATC CTGAGAGCGT GGGAACTACG
CTCGGACAAA AAATATTTTA CAACTTCCTC AACAGAATCT GA
 
Protein sequence
MDITLIIDNY DSFVYNIAQS IGELGSYPLV VRNDEISVKG VERLRPDRIV ISPGPGSPEK 
AEDVGIVPEV IRILGKRIPI LGVCLGHQAI GYTFGARIRR ARVIYHGKLS TVIRTGDSPL
YTGLPTEFKA TRYHSLVVDN VSSPLMVDSV SKEDGEIMGL HHAEYRIYGV QFHPESVGTT
LGQKIFYNFL NRI