| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1673 |
|---|
| Symbol | |
|---|
| ID | 5105319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1614470 |
|---|
| End bp | 1614802 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640507567 |
|---|
| Product | DNA-directed RNA polymerase, subunit K |
|---|
| Protein accession | YP_001191752 |
|---|
| Protein GI | 146304436 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0083987 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.431934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG ACGAAGGCAA AGGAATTAAT CCTTTGACAG AGGTTTATGT GGAGAGCTGG
AGAAATAGGC TCACTTCTTA CGAGAGGGCT AGAATAATAA GCGCTAGGGC ACTTCAGTTG
GCCATGGGCG CTTCACCTCT TATTGATGTT TCCTCGACAG GACTAGAGGG GGCAAGTTCC
ATTAGAATAG CCGAGGAAGA GTTTAGATCT AACCTCCTAC CCATAAGTGT AAGGAGGAGG
TTCCCCAATG GGAAAGTTGA GCTTATATCT GTAATGAAGA TTATCTCAAA AAGTCCTAGG
CCTTTAGCTG ATGATGTGAG TCATGCCGAA TGA
|
|---|
| Protein sequence | MSQDEGKGIN PLTEVYVESW RNRLTSYERA RIISARALQL AMGASPLIDV SSTGLEGASS
IRIAEEEFRS NLLPISVRRR FPNGKVELIS VMKIISKSPR PLADDVSHAE
|
|---|
| |