| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1532 |
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| Symbol | |
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| ID | 5104060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1494948 |
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| End bp | 1495688 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640507419 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001191612 |
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| Protein GI | 146304296 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.942756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0737829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAT CAAATCTGTT ACAGTCGGGT AACCTGAATC TGGCCCTGTT AAAACTAAGA
GAAATGGTAG AACAAAATCC CTCCAAGGAG AACTATCAAC TCCTTGGTAG AGTCCTCCTC
GAACTAGGAA GAGACGAGGA GGCAATTGAT GCCTTCATTA AGGGAGAAGA CTACGTTAGC
GCTTCCAGAT TGTTAGCGCT CAAGGATCCA GATACAACCC TGGACCTTCT AAGGGATAAG
CAGAGTAAGG AAGCTAAGAT AATTCGTGCC ATGTTACTTC TCAGGAAGGA AAGATACGAC
GAGGCTCTTA GGGAGATAGA AAACGTAGAG GACAAGGATG CCCTTCTCCT AAAGGTGAAG
GGAATTTCCG AGTACTTTAC CGGAAGATTT TATGAGGCAC TAAGGGACCT TAGTAGAGCC
ATCTCGTATT ATCCCTTGGA TGCGGATCTA TTCTATTTCA GAGCCCTCAC CAGGATATCG
CTAGGGGATG AACAAAACGC TGAGAAGGAT CTGGACATTG CCATAAACCT TAATCCCTAT
TACGCTGAGG CCTACTTAAA CAAGGGAATC CTCACGGAGA AGAAGGGAGA CATTCAAGGG
GCCATCAAGC TCTATACCAA GAGCATAGAC CTAAAGCCAA ACTACAAGGA GGCCTACATT
AGAAGATCCA AGGCCTATCA CCAACTTGGG AGGGAGGAGG AGGCAAAATC CGATCTCGCG
AAATCGGAGA AGCTAGACTA G
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| Protein sequence | MDISNLLQSG NLNLALLKLR EMVEQNPSKE NYQLLGRVLL ELGRDEEAID AFIKGEDYVS
ASRLLALKDP DTTLDLLRDK QSKEAKIIRA MLLLRKERYD EALREIENVE DKDALLLKVK
GISEYFTGRF YEALRDLSRA ISYYPLDADL FYFRALTRIS LGDEQNAEKD LDIAINLNPY
YAEAYLNKGI LTEKKGDIQG AIKLYTKSID LKPNYKEAYI RRSKAYHQLG REEEAKSDLA
KSEKLD
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