| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1511 |
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| Symbol | |
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| ID | 5104040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1474199 |
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| End bp | 1474810 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640507399 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001191592 |
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| Protein GI | 146304276 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCG AAAAGCTAGT GGTCAGGTTA AGAAAGGCTG GTTACCCGGT GACTGCCAAG
CAAGTATTCA GGGCAGTTAC TAAGGTAATG GGAAAAAGTA ATTTTCCAAA TCAGGTAGGG
TTAAATCCAG TGGACGTGGG AGAACTTCTA TATGAGCTTG GGATATATCC ATCGAGCCAA
ATACTTGGTC AATTGGGTGG AGACTATACC CCGAGTCAGG ATTATTTTCT ATATGAGGAT
GCCAAGGAGT TCCTCGAGTA CCTAAACTCG AAGGGTGTAG ATGTGGTTCT AATTACAAAT
GCAACTAGAA GAATGCATGA CGTAATAGAT TCCTTGGGAA TCAAAAAGTA CGTTAAGGCA
GTCATCGCCT CATGCGACGT TGGTGTAGTG AAGCCTCATC CCAGGATTTT CCGATACGCG
CTTAACTACG TTGCACAACC AGCCATACAC ATAGGTGATA TATACGAACT GGATTACATT
GGTGCTAAAA GGGCTGGTCT CGAATCCCTA CTCCTTGACA GGTTTGGATT CTACGAGGAC
GTAAAGGTAA ACAAGGTGAG GAACTTATAC GAAGCGATGA CCTATCTCGA TAAGCAAAAA
CTCCTTGTTT AA
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| Protein sequence | MSFEKLVVRL RKAGYPVTAK QVFRAVTKVM GKSNFPNQVG LNPVDVGELL YELGIYPSSQ
ILGQLGGDYT PSQDYFLYED AKEFLEYLNS KGVDVVLITN ATRRMHDVID SLGIKKYVKA
VIASCDVGVV KPHPRIFRYA LNYVAQPAIH IGDIYELDYI GAKRAGLESL LLDRFGFYED
VKVNKVRNLY EAMTYLDKQK LLV
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