| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1447 |
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| Symbol | |
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| ID | 5104817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1414270 |
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| End bp | 1415532 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507335 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191528 |
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| Protein GI | 146304212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGTA AACCAAAAAT CTCACCCACT GAGGTGTTCT TCCTGTCCTT TGGCGGACAA
TCGCCCTTCA TTTCACTCAT GGCGTTCGGC ACAGTGATGA TTTCCTACGT TGGTATCCAT
TCTGGGTTCG CGATGATAGT TACTACCCTC GTGGTAATGG CTAACGCGTC AGTGGTTTAT
TCACTTTCAA AGAGATTCAA CAAAGGAGGT GGGTATTACA CCTATGCCCT ACACACGCTG
ACCAATAACT TGGGCATAAC TACGGGCTGG ATGTATATTC TTTACTCGTT AAGCTACGGT
GGTACCTTGA TGATGGGTGG GGTCTATGTA CTTAACCTGT TAACAGGTAT TAGTCCCCTA
TACCTTACCC TTATAGTTTC AATTCTTGCC TCCACGATAG TTATTGCTGG AGTGAAGCTT
TCAGCCAAGT ACGCAGTGGC CGTGGGCATA TTGGAGATAA TAGCAATCCT AGGTCTCTCG
ATTTTCTTCA TGTATAGATC TGGGTTTGCG TTCTATAATC CTATTCCCAC TTCTCTTCCA
ATGAACCTGC CAGAGGCAAT ACTTTTCGGT ATTGGAATAC CATCGGGCTA CTCCAGCATA
GTCAGCTACC CCGAGGAGAT TGAGAACGCT TCCAAGACAG TGAGCAGAAT TTCCCTCTTA
GTTCCAGTCA TAGGAGGTGG ATTGGCATCC TTCTTCTTCT ACGCTTTAGC GGCCCTAGGT
TTCACGGGTA ATCTAGTTGA GTTGCTCACC TCAGAGTTCG GACTTGTAGG GGGTATCCTG
ATATCCGCCA TAGCCCTGAG TGATGCTGTG CTGGGAGGAA TAGCGTACCT GTTGGCTGGG
TCAAGGACTC TCTACAACAT GTCCAAAAAT GGCCATCTAA TCAGTTATCT CGCGAGGGAG
TATAAGGGTC AGCCCAAGGT GGCCGAGGTA CTAATCTCGG TGTTGGTGAT ACTCTCACTC
TCTTTTCTCT CAATGAACTT CAGTCCTCTG GTGGCGCTAG GCCTGATTGG AGGGGTATCA
GGAATGAGTA ACCTTTACAT CCATATGGCG GCTGGGGTCT CTCTCGCCAG AATGGGAAGG
AAAAAGCCCC TGAAGCATCT CCACGAAATA GCCTTCTCCG TTGTTTCCCT AGCTTTCTCG
GCCTGGGTCC TGCTCATTTC ACTGGTTCAG CTAGAGAAGT ACGTGGTTTA CTTCTTCTTG
GGTTGGATAA TTCTAGGTTT TCTCCTAGCT GAGAGCCTTG AAATGGTTAA GGAGGAAGAG
TAA
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| Protein sequence | MGSKPKISPT EVFFLSFGGQ SPFISLMAFG TVMISYVGIH SGFAMIVTTL VVMANASVVY
SLSKRFNKGG GYYTYALHTL TNNLGITTGW MYILYSLSYG GTLMMGGVYV LNLLTGISPL
YLTLIVSILA STIVIAGVKL SAKYAVAVGI LEIIAILGLS IFFMYRSGFA FYNPIPTSLP
MNLPEAILFG IGIPSGYSSI VSYPEEIENA SKTVSRISLL VPVIGGGLAS FFFYALAALG
FTGNLVELLT SEFGLVGGIL ISAIALSDAV LGGIAYLLAG SRTLYNMSKN GHLISYLARE
YKGQPKVAEV LISVLVILSL SFLSMNFSPL VALGLIGGVS GMSNLYIHMA AGVSLARMGR
KKPLKHLHEI AFSVVSLAFS AWVLLISLVQ LEKYVVYFFL GWIILGFLLA ESLEMVKEEE
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