| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1429 |
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| Symbol | |
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| ID | 5104799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1399327 |
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| End bp | 1400433 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507317 |
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| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
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| Protein accession | YP_001191510 |
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| Protein GI | 146304194 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.519726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGTTA TAGGAGATAT AGGGCCTTAC TGCCTGACCT CAGACGGGCT CAGAGAAGGA
CCGTGCATTA AGGACCAGAG CGAAGAGGAG AGTCTGGGCT ATGGTTCATT CAAGTTCGTT
TATGGCCCGT CAGCTGGGGG TCTACTGGAG TCAGTGGGAT TTGAAATTAC AACTTATGGA
GAAAGCATAG AGAAAATAAA TCATTTACCA TATAAGGGTA GACAAATAAC TCTCTCCGGG
CTGACAATTG GAGATGCCCT CCTTAGAGTT GAGAGAATTA ACGGAGCGTT CACCGCATCT
CATTCCATCT CTTTTCTTCA GGCAATTGAG AGTGCCTTAG AGATAGAGGT GCCTCACGAC
GTTGTTATTT CTAGGATGGC TCAGCTCGAG CTTGAAAGGA TAAGGAATAA TCTACTCGTG
ATTCAGAGGG TATTGGAATC GGCATCGTTC CTGGTTCCAT CATTTCTTCT TCTCCAGCAG
ATAGAGGAGG TTAACAGGGC CATAGCGAGG TCTTGCGGTC ATAGATATTT CTTTGGGGCT
AACTACCCAG GAGGAGTTAG ATGTGAGCTT AAGCTTCCGT CTCTTAAGAT TTCGGACATA
GAGAGAACGC TAGAGAACAG GATCTTCATT GACAGACTCC AAGGCAATGG AGTGGTTAAG
GATAGCTTCT CCATTGGGCC TGTCGCCAGG GCCTCTGGGT TCAAGTACGA CGCAAGGCTA
GACTCGGATT TTCTAGCTTA CAGGAACTTT GACCTGAGAA TCCCTACTCA GGATCAGGGA
GATGCCTTCT CCAGGATCCT AGTTCGTCTG GAGGAGATTA AGGAATCGCT TAGGCTACTC
CAGGAGCTCA AGGTAAAACC CTGTAGTTTC ACCATGAAGA TAAGGGATGG AGAGGGAATA
GGAAGAGTTG AGAGCCCATC TGGAGATCTG GCTTACCTCA CAAGGGTGAG GAGTGGCCAC
GTGGAGAGAG CATACCTTTT AGCTCCATCA AAGGTAAACA TGAGACTTTT CCTCAAGTCC
ATGCCTGGAA ATATCTTCAC TGACTTTCCC TTCAACTGGG AAAGTTTCGG GATCTGGATA
TCTGAGCTCG AGGTCGATCT GGAATGA
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| Protein sequence | MRVIGDIGPY CLTSDGLREG PCIKDQSEEE SLGYGSFKFV YGPSAGGLLE SVGFEITTYG
ESIEKINHLP YKGRQITLSG LTIGDALLRV ERINGAFTAS HSISFLQAIE SALEIEVPHD
VVISRMAQLE LERIRNNLLV IQRVLESASF LVPSFLLLQQ IEEVNRAIAR SCGHRYFFGA
NYPGGVRCEL KLPSLKISDI ERTLENRIFI DRLQGNGVVK DSFSIGPVAR ASGFKYDARL
DSDFLAYRNF DLRIPTQDQG DAFSRILVRL EEIKESLRLL QELKVKPCSF TMKIRDGEGI
GRVESPSGDL AYLTRVRSGH VERAYLLAPS KVNMRLFLKS MPGNIFTDFP FNWESFGIWI
SELEVDLE
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