Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1385 |
Symbol | |
ID | 5104595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1360978 |
End bp | 1361400 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640507274 |
Product | PilT domain-containing protein |
Protein accession | YP_001191467 |
Protein GI | 146304151 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0147283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.00000509025 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAAATATT TCGACACTAG CGTTATTCTT CTGTCCATCC TTAACGATCC TAGAAGAGAA AGGGCCATAA TGGAGTTAGA GAAGGGCGGA ATCACGTCAG AGTTGGGTTT CGTGGAACTA GTTAGCTACC TTTCTAGGAA TATGACAGAC CCTTTGCCCA ACGCCGTGAG CATCATTAAT AGGTTCAACA TATCAGTGAG GAGTCTCCCT AAGATTAGGT CCTCGCCCAT GGGGGAGACG ACGGAGGTGG TTCATTTCGC GTTGAGGATA GCGGAGGAGG TGAAATTGAG GACGCTTGAT CTTCTCCACG TTAGCTATGC CGTTCTTCTG GGGGCAAGTG AACTTGTGAC AGCTGACAGG GAGTTTCTCA GGGCCAAGGC TTTCCTATCA AGGCAGGGTG TCGAGGTAAA CCTACTGGAA TAG
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Protein sequence | MKYFDTSVIL LSILNDPRRE RAIMELEKGG ITSELGFVEL VSYLSRNMTD PLPNAVSIIN RFNISVRSLP KIRSSPMGET TEVVHFALRI AEEVKLRTLD LLHVSYAVLL GASELVTADR EFLRAKAFLS RQGVEVNLLE
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