Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1346 |
Symbol | |
ID | 5103405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1319266 |
End bp | 1320414 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640507235 |
Product | major facilitator transporter |
Protein accession | YP_001191428 |
Protein GI | 146304112 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.217122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAG AGACCTTCCT AGCAATTGGT TTCATTGTGA TGTGCTTCAA CTCCTTATAT CAGTATTCAT GGAATGCTCT GGAGCCTCTC CTGAGGACAG GCTTCTCTGT TTCCGTGGTG CAGATAGCCC TTGGCTTCAC CCTATTCAGT GTGTTCTCCT CCTTCTTCCA GCCCCTGGGA GGTCATTTCG CTGATAGGGA TGGTCCTAGG AACGTGGGCA TCGTGGCATC GGTCCTGGCC TCACTGGGGT TTCTTGGAAC TTACCTCTCG CCTAACATTC TCTACTTCTA CGTATTCTGG TCCCTTGGAA GTATTGGTGA GGGAATACTT TACGGGATAG CAGCAAACCT CGCCATGAAA TGGTTTATCG ACAGAATGGG TTTTGCCACG GGTATCGTAT CCATGGGATT TGGACTAGGC TCGGTGGTGG CTAACCCCCT AATACTTCAC GTGGATAATT ACAAGATAGT CACGCTAACA ATAGGTCTCT CTGAACTCGT AGTGGTCACG GTCCTGATGT CCCTTATTAG TTATCCCGCA TCAAGTAAAG GAAGACCACC AGGGCAGGTG ATCTTCACTA CCAAGTTCTG GCTAATCTAC GTCTCCTTCG TGGGCGCAGT TATTCCACTG ACTGCCATCT CCTCTCAACT TGCTGTTCTA GGTAAAAACC TCTCACAGGA GGAACTTACG ATCCTTATCT CGATTTTTCC CTTACTCAGT GGTGGGATGA GGCCAATCAT GGGAAGGATA GCTGACAAAG TTGGAATAGT GAGGACTACC CTTATACTTA ACGCGATCCT GCTGGTGGGC TCCTTGACTC TCCTGGTCGG CCAATTGATC CCAACGACGG TTCTGGTGGG ATTTGCTGGC GGGTCCATGA TCACCTTGTA CTTTAACGTT GCAGGAGAGA TCTTTGGTAC TAGGTTCTCC ACGGTTAATA GCGGTATCCT GTATACGGGA AAGGCACTTG GTGGGGTTCT GGGCAGTTTC GTTTTCGCCT ATCTTTATAC GTTAAACGTG ACCACATCTG AGATTTATTT AGTTCTCGGA AGCCTTGTGG GGGTGCTTGC CTTGATTCCT GTTATTCCTA GGATTAGAAC TGGTCAAAGG GTGATGGGTC AGCACGGCAA TCAGGGAAAC ATGAAGTGA
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Protein sequence | MKRETFLAIG FIVMCFNSLY QYSWNALEPL LRTGFSVSVV QIALGFTLFS VFSSFFQPLG GHFADRDGPR NVGIVASVLA SLGFLGTYLS PNILYFYVFW SLGSIGEGIL YGIAANLAMK WFIDRMGFAT GIVSMGFGLG SVVANPLILH VDNYKIVTLT IGLSELVVVT VLMSLISYPA SSKGRPPGQV IFTTKFWLIY VSFVGAVIPL TAISSQLAVL GKNLSQEELT ILISIFPLLS GGMRPIMGRI ADKVGIVRTT LILNAILLVG SLTLLVGQLI PTTVLVGFAG GSMITLYFNV AGEIFGTRFS TVNSGILYTG KALGGVLGSF VFAYLYTLNV TTSEIYLVLG SLVGVLALIP VIPRIRTGQR VMGQHGNQGN MK
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