| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1161 |
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| Symbol | |
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| ID | 5103509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1124888 |
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| End bp | 1125736 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507053 |
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| Product | CRISPR-associated Csx7 family protein |
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| Protein accession | YP_001191246 |
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| Protein GI | 146303930 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02581] CRISPR-associated RAMP protein, SSO1426 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.59336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00757758 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGATGT ACCTGATTAG AAAGGACGTG ATAAAGAGGG TTGTCGTGTT TCAGGGGGTA
CTGAGGGCTG ACTCCCCTGT CCTGGTGAGC ACTGGAGAAA GGGGTCCAAT CAAGGAAGTC
ATCAGGGACG CGGATGGTAA CCCATACATT CCCGGGAGCT CTTGGAAGGG GGTCTTCAGG
TCTGCAGGGG AGAGGATAGC GAGGGAGAGG GGCCTCACGG TATGTTCTGG GCTCACGAAC
GACAGTTGCC TACGGAAATA CCAAAAGGAG AGAGATTTCA TGAATGCCTT AAGGCAGGGA
CAACAACAAC TTCCTACCGC GATGGAGATA GCCTGGAACT ACACCTGTCT CAACTGTAAG
GTGTTCGGGA CGATGTCGAT TCTGGGCCAG GTTAGGTTCA TGGACTCGGT CTCTGCAGAT
TACAGGGTGA ATAACCGCAC CATGATAGCC ATAAGCAGGA AGGACGGCTC CGTTGCCGGA
AAGGCGCTTG TTACCCTAGA GTACCTAGAT GTGGGATCGC ATTTCCCCTT CACGTTGTAC
ACCTATAATC TCCCGAACTA CGCCCTAGGC TACCTGATCA GGATCATGGA GGACATTCAC
AAACACCTGG TTCAGGTTGG GGGGAACAAG AGCAGAGGTT TCGGTTTCCT CTCCTTTGAG
AAGTTGTCCA TGAACATCAT GGTACCAGAG AACTCGACCG TAGAACATCT CCCAAAGCTG
GACGATGACG ACGTTGACGT GAAAATAAAC GCGAAGGAGT TGAGGGATCT CCCGGGAGAC
AGGTTCTTCG AGTTGACGTC CCCGCTAAAG GAGGCATTCA AGAATGCAAG GATCTCGTAC
CCTCGCTAG
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| Protein sequence | MEMYLIRKDV IKRVVVFQGV LRADSPVLVS TGERGPIKEV IRDADGNPYI PGSSWKGVFR
SAGERIARER GLTVCSGLTN DSCLRKYQKE RDFMNALRQG QQQLPTAMEI AWNYTCLNCK
VFGTMSILGQ VRFMDSVSAD YRVNNRTMIA ISRKDGSVAG KALVTLEYLD VGSHFPFTLY
TYNLPNYALG YLIRIMEDIH KHLVQVGGNK SRGFGFLSFE KLSMNIMVPE NSTVEHLPKL
DDDDVDVKIN AKELRDLPGD RFFELTSPLK EAFKNARISY PR
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